Leersia perrieri      Asp-Based PSP/FCP


※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays an important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylates Ser5 in CTD domain of RNA polymerase II and plays a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also acts as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 21 genes.  Reviewed (0 or Unreviewed (21

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Lep-1343
LPERR01G20230
A0A0D9V373
2
iEKPD-Lep-1345
LPERR01G21910
A0A0D9V3U9
3
iEKPD-Lep-1349
LPERR01G27330
A0A0D9V5Z8
4
iEKPD-Lep-1350
LPERR01G31130
A0A0D9V7G5
5
iEKPD-Lep-1352
LPERR01G32470
A0A0D9V7Z1
6
iEKPD-Lep-1795
LPERR01G33390
A0A0D9V8E0
7
iEKPD-Lep-1796
LPERR01G33410
A0A0D9V8E3
8
iEKPD-Lep-1354
LPERR01G33580
A0A0D9V8G9
9
iEKPD-Lep-1371
LPERR02G20770
A0A0D9VIR6
10
iEKPD-Lep-1373
LPERR02G29480
A0A0D9VM54
11
iEKPD-Lep-1797
LPERR02G29490
A0A0D9VM55
12
iEKPD-Lep-1397
LPERR03G34960
A0A0D9W1E8
13
iEKPD-Lep-1405
LPERR04G15800
A0A0D9W7F5
14
iEKPD-Lep-1413
LPERR05G05600
A0A0D9WDS3
15
iEKPD-Lep-1799
LPERR05G12060
A0A0D9WG44
16
iEKPD-Lep-1418
LPERR05G15560
A0A0D9WHH7
17
iEKPD-Lep-1419
LPERR05G18490
A0A0D9WIK5
18
iEKPD-Lep-1422
LPERR05G21600
A0A0D9WJT4
19
iEKPD-Lep-1423
LPERR05G21610
A0A0D9WJT5
20
iEKPD-Lep-1440
LPERR07G06010
A0A0D9WWQ6
21
iEKPD-Lep-1801
LPERR11G11820
A0A0D9XSG4