Selaginella moellendorffii      Asp-Based PSP/FCP


※ FCP family introduction

    FCP/SCP phosphatase belongs to a family of phosphatase which uses an Asp nucleophile for catalysis. FCP/SCP is characterized by its phosphatase activity towards the CTD of the largest subunit of RNA polymerase II (1). At least seven members have been identified in human genome and FCP/SCP phosphatases share a conserved catalytic signature, which is known as DXDXT/V (2). Family member FCP1 is conserved among all eukaryotes and plays an important role in cell survival in budding and fission yeasts. SCP1 preferentially dephosphorylates Ser5 in CTD domain of RNA polymerase II and plays a role in the regulation of gene expression by controlling the transition from initiation/capping to processive transcript elongation (3). In addition, SCP1 also acts as a key regulator that functions in silencing neuronal gene expression (4).

Reference
1. Shi, Y. (2009) Serine/threonine phosphatases: mechanism through structure. Cell, 139, 468-484. PMID: 19879837
2. Moorhead, G.B., Trinkle-Mulcahy, L. and Ulke-Lemee, A. (2007) Emerging roles of nuclear protein phosphatases. Nat Rev Mol Cell Biol, 8, 234-244. PMID: 17318227
3. Yeo, M., Lin, P.S., Dahmus, M.E. and Gill, G.N. (2003) A novel RNA polymerase II C-terminal domain phosphatase that preferentially dephosphorylates serine 5. J Biol Chem, 278, 26078-26085. PMID: 12721286
4. Yeo, M., Lee, S.K., Lee, B., Ruiz, E.C., Pfaff, S.L. and Gill, G.N. (2005) Small CTD phosphatases function in silencing neuronal gene expression. Science, 307, 596-600. PMID: 15681389


There are 77 genes.  Reviewed (0 or Unreviewed (77

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Sem-1226
SELMODRAFT_103542
D8RWT2
SELMODRAFT_103542
2
iEKPD-Sem-1257
SELMODRAFT_108059
D8S403
SELMODRAFT_108059
3
iEKPD-Sem-1252
SELMODRAFT_111225
D8S8Q6
SELMODRAFT_111225
4
iEKPD-Sem-1261
SELMODRAFT_111624
D8S8P9
SELMODRAFT_111624
5
iEKPD-Sem-1211
SELMODRAFT_121036
D8SNG6
SELMODRAFT_121036
6
iEKPD-Sem-1231
SELMODRAFT_121192
D8SNH2
SELMODRAFT_121192
7
iEKPD-Sem-1210
SELMODRAFT_121210
D8SNF8
SELMODRAFT_121210
8
iEKPD-Sem-1218
SELMODRAFT_121282
D8SNG0
SELMODRAFT_121282
9
iEKPD-Sem-1229
SELMODRAFT_122967
D8SRI3
SELMODRAFT_122967
10
iEKPD-Sem-1228
SELMODRAFT_123069
D8SRJ5
SELMODRAFT_123069
11
iEKPD-Sem-1221
SELMODRAFT_123223
D8SRH8
SELMODRAFT_123223
12
iEKPD-Sem-1251
SELMODRAFT_124475
D8STJ3
SELMODRAFT_124475
13
iEKPD-Sem-1198
SELMODRAFT_125729
D8SVF2
SELMODRAFT_125729
14
iEKPD-Sem-1258
SELMODRAFT_126324
D8SW72
SELMODRAFT_126324
15
iEKPD-Sem-1192
SELMODRAFT_126751
D8SWY6
SELMODRAFT_126751
16
iEKPD-Sem-1263
SELMODRAFT_129025
D8T018
SELMODRAFT_129025
17
iEKPD-Sem-1206
SELMODRAFT_129286
D8T0Q9
SELMODRAFT_129286
18
iEKPD-Sem-1242
SELMODRAFT_131171
D8T3J4
SELMODRAFT_131171
19
iEKPD-Sem-1197
SELMODRAFT_131302
D8T3V9
SELMODRAFT_131302
20
iEKPD-Sem-1236
SELMODRAFT_131706
D8T4R8
SELMODRAFT_131706
21
iEKPD-Sem-1214
SELMODRAFT_133639
D8T7B5
SELMODRAFT_133639
22
iEKPD-Sem-1247
SELMODRAFT_135380
D8TAC3
SELMODRAFT_135380
23
iEKPD-Sem-1230
SELMODRAFT_137174
D8TD50
SELMODRAFT_137174
24
iEKPD-Sem-1249
SELMODRAFT_137904
D8TEC3
SELMODRAFT_137904
25
iEKPD-Sem-1248
SELMODRAFT_137927
D8TEC6
SELMODRAFT_137927
26
iEKPD-Sem-1178
SELMODRAFT_173599
D8RRN6
SELMODRAFT_173599
27
iEKPD-Sem-1239
SELMODRAFT_79490
D8QY70
SELMODRAFT_174307
28
iEKPD-Sem-1212
SELMODRAFT_23521
D8T2E6
SELMODRAFT_23521
29
iEKPD-Sem-1215
SELMODRAFT_32861
D8RXJ3
SELMODRAFT_32861
30
iEKPD-Sem-1276
SELMODRAFT_36536
D8T795
SELMODRAFT_36536
31
iEKPD-Sem-1233
SELMODRAFT_402603
D8QR72
SELMODRAFT_402603
32
iEKPD-Sem-1918
SELMODRAFT_405568
D8QZ05
SELMODRAFT_405568
33
iEKPD-Sem-1269
SELMODRAFT_405868
D8QZY1
SELMODRAFT_405868
34
iEKPD-Sem-1273
SELMODRAFT_408265
D8R7R4
SELMODRAFT_408265
35
iEKPD-Sem-1917
SELMODRAFT_411029
D8RHS4
SELMODRAFT_411029
36
iEKPD-Sem-1216
SELMODRAFT_411169
D8RGS7
SELMODRAFT_411169
37
iEKPD-Sem-1234
SELMODRAFT_411177
D8RGT8
SELMODRAFT_411177
38
iEKPD-Sem-1246
SELMODRAFT_415083
D8RUY8
SELMODRAFT_415083
39
iEKPD-Sem-1237
SELMODRAFT_415093
D8RV00
SELMODRAFT_415093
40
iEKPD-Sem-1266
SELMODRAFT_415773
D8RX72
SELMODRAFT_415773
41
iEKPD-Sem-1241
SELMODRAFT_417095
D8S1C3
SELMODRAFT_417095
42
iEKPD-Sem-1235
SELMODRAFT_417101
D8S1D0
SELMODRAFT_417101
43
iEKPD-Sem-1915
SELMODRAFT_418187
D8S4Y5
SELMODRAFT_418187
44
iEKPD-Sem-1265
SELMODRAFT_418315
D8S5B5
SELMODRAFT_418315
45
iEKPD-Sem-1268
SELMODRAFT_418336
D8S5E0
SELMODRAFT_418336
46
iEKPD-Sem-1227
SELMODRAFT_418345
D8S5F1
SELMODRAFT_418345
47
iEKPD-Sem-1223
SELMODRAFT_418692
D8S6U9
SELMODRAFT_418692
48
iEKPD-Sem-1224
SELMODRAFT_423987
D8SNF6
SELMODRAFT_423987
49
iEKPD-Sem-1254
SELMODRAFT_424001
D8SNH0
SELMODRAFT_424001
50
iEKPD-Sem-1222
SELMODRAFT_424005
D8SNH4
SELMODRAFT_424005
51
iEKPD-Sem-1256
SELMODRAFT_424076
D8SNQ7
SELMODRAFT_424076
52
iEKPD-Sem-1271
SELMODRAFT_424529
D8SQ72
SELMODRAFT_424529
53
iEKPD-Sem-1240
SELMODRAFT_425135
D8SS46
SELMODRAFT_425135
54
iEKPD-Sem-1267
SELMODRAFT_426476
D8SWH5
SELMODRAFT_426476
55
iEKPD-Sem-1253
SELMODRAFT_427569
D8T009
SELMODRAFT_427569
56
iEKPD-Sem-1259
SELMODRAFT_4374
D8SP37
SELMODRAFT_4374
57
iEKPD-Sem-1916
SELMODRAFT_440109
D8RA55
SELMODRAFT_440109
58
iEKPD-Sem-1270
SELMODRAFT_442163
D8RRA7
SELMODRAFT_442163
59
iEKPD-Sem-1283
SELMODRAFT_443858
D8S4Y2
SELMODRAFT_443858
60
iEKPD-Sem-1262
SELMODRAFT_4536
D8RIM4
SELMODRAFT_4536
61
iEKPD-Sem-1225
SELMODRAFT_48489
D8SNG2
SELMODRAFT_48489
62
iEKPD-Sem-1220
SELMODRAFT_5469
D8SRI0
SELMODRAFT_5469
63
iEKPD-Sem-1238
SELMODRAFT_5484
D8SHQ6
SELMODRAFT_5484
64
iEKPD-Sem-1209
SELMODRAFT_5501
D8S8N5
SELMODRAFT_5501
65
iEKPD-Sem-1204
SELMODRAFT_5502
D8SQ07
SELMODRAFT_5502
66
iEKPD-Sem-1205
SELMODRAFT_5512
D8SJM3
SELMODRAFT_5512
67
iEKPD-Sem-1217
SELMODRAFT_5836
D8SNE4
SELMODRAFT_5836
68
iEKPD-Sem-1250
SELMODRAFT_58587
D8SES1
SELMODRAFT_58587
69
iEKPD-Sem-1219
SELMODRAFT_5868
D8SNG4
SELMODRAFT_5868
70
iEKPD-Sem-1208
SELMODRAFT_5873
D8RRX2
SELMODRAFT_5873
71
iEKPD-Sem-1260
SELMODRAFT_5876
D8RG76
SELMODRAFT_5876
72
iEKPD-Sem-1232
SELMODRAFT_67516
D8RAI6
SELMODRAFT_67516
73
iEKPD-Sem-1255
SELMODRAFT_7432
D8RG82
SELMODRAFT_7432
74
iEKPD-Sem-1245
SELMODRAFT_75138
D8QR26
SELMODRAFT_75138
75
iEKPD-Sem-1195
SELMODRAFT_77112
D8QTN0
SELMODRAFT_77112
76
iEKPD-Sem-1243
SELMODRAFT_85337
D8R502
SELMODRAFT_85337
77
iEKPD-Sem-1244
SELMODRAFT_87588
D8R7V9
SELMODRAFT_87588