Populus trichocarpa      Atypical/ABC1


※ ABC1 family introduction

    ABC1 kinases are family of aarF domain-containing protein kinases which belong to atypical kinase group. Five members have been identified in human genome, known as ADCK1-ADCK5. ABC1 kinases contain the conserved protein kinase motifs which is responsible for the ATP binding and phosphotransfer reaction. However, as the overall sequence is distinct with ePK domain and lack of several usual kinase motifs, they are classified into "Atypical" kinase group (1).

Reference
1. Lagier-Tourenne, C., Tazir, M., Lopez, L.C., Quinzii, C.M., Assoum, M., Drouot, N., Busso, C., Makri, S., Ali-Pacha, L., Benhassine, T. et al. (2008) ADCK3, an ancestral kinase, is mutated in a form of recessive ataxia associated with coenzyme Q10 deficiency. Am J Hum Genet, 82, 661-672. PMID: 18319074


There are 22 genes.  Reviewed (0 or Unreviewed (22

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Pot-g001
POPTR_0002s18650
2
iEKPD-Pot-0056
POPTR_0001s14410
B9GMF4
POPTR_0001s14410g
3
iEKPD-Pot-0187
POPTR_0002s00200
B9GPJ6
POPTR_0002s00200g
4
iEKPD-Pot-0211
POPTR_0002s06180
B9GT46
POPTR_0002s06180g
5
iEKPD-Pot-0255
POPTR_0002s18630
B9GRW0
POPTR_0002s18630g
6
iEKPD-Pot-0403
POPTR_0004s03280
B9H204
POPTR_0004s03280g
7
iEKPD-Pot-0426
POPTR_0004s07340
B9H3K2
POPTR_0004s07340g
8
iEKPD-Pot-0546
POPTR_0005s08490
U5GGZ7
POPTR_0005s08490g
9
iEKPD-Pot-0735
POPTR_0006s29050
B9N6A4
POPTR_0006s29050g
10
iEKPD-Pot-0736
POPTR_0006s29150
U5GCC8
POPTR_0006s29150g
11
iEKPD-Pot-0776
POPTR_0007s06450
U5G7K4
POPTR_0007s064501g
12
iEKPD-Pot-0839
POPTR_0008s06780
B9HHP1
POPTR_0008s06780g
13
iEKPD-Pot-1035
POPTR_0010s22780
B9HUD9
POPTR_0010s22780g
14
iEKPD-Pot-1093
POPTR_0011s04110
B9HYN5
POPTR_0011s04110g
15
iEKPD-Pot-1234
POPTR_0012s09520
B9I3L8
POPTR_0012s09520g
16
iEKPD-Pot-1361
POPTR_0014s16660
B9IAU6
POPTR_0014s16660g
17
iEKPD-Pot-1410
POPTR_0015s10290
B9IF59
POPTR_0015s10290g
18
iEKPD-Pot-1601
POPTR_0018s03080
B9ILA8
POPTR_0018s03080g
19
iEKPD-Pot-1602
POPTR_0018s03930
U5FFL0
POPTR_0018s03930g
20
iEKPD-Pot-1603
POPTR_0018s03950
U5FFA9
POPTR_0018s03950g
21
iEKPD-Pot-1611
POPTR_0018s04280
U5FH99
POPTR_0018s04280g
22
iEKPD-Pot-1708
POPTR_0019s08950
U5FGU4
POPTR_0019s08950g