Carlito syrichta      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 16 genes.  Reviewed (0 or Unreviewed (16

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Cas-0219
ENSTSYG00000009678.2
A0A1U7TAS0
ATM
2
iEKPD-Cas-0071
ENSTSYG00000002718.2
A0A1U7UJL2
ATR
3
iEKPD-Cas-0283
ENSTSYG00000012607.2
A0A1U7U6S9
MTOR
4
iEKPD-Cas-g004
ENSTSYG00000003154.2
A0A1U7U425
PI4KA
5
iEKPD-Cas-0186
ENSTSYG00000008035.2
A0A1U7UMP2
PI4KB
6
iEKPD-Cas-0054
ENSTSYG00000002273.2
A0A1U7UJN6
PIK3C2A
7
iEKPD-Cas-g003
ENSTSYG00000011415.2
A0A1U7UHU4
PIK3C2B
8
iEKPD-Cas-0193
ENSTSYG00000008388.2
A0A1U7UEZ4
PIK3C2G
9
iEKPD-Cas-0031
ENSTSYG00000001290.2
A0A1U7V0Z5
PIK3C3
10
iEKPD-Cas-0095
ENSTSYG00000004236.2
A0A1U7TPX5
PIK3CA
11
iEKPD-Cas-0231
ENSTSYG00000010357.2
A0A1U7UHD6
PIK3CB
12
iEKPD-Cas-0403
ENSTSYG00000032828.1
A0A1U7SS21
PIK3CD
13
iEKPD-Cas-0334
ENSTSYG00000026615.1
A0A1U7T788
PIK3CG
14
iEKPD-Cas-0094
ENSTSYG00000004199.2
A0A1U7T1G9
PRKDC
15
iEKPD-Cas-0240
ENSTSYG00000011095.2
A0A1U7T5V5
SMG1
16
iEKPD-Cas-0060
ENSTSYG00000002471.2
A0A1U7V0A4
TRRAP