Cavia porcellus      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 16 genes.  Reviewed (0 or Unreviewed (16

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Cap-0179
ENSCPOG00000007924.4
H0VB67
2
iEKPD-Cap-0255
ENSCPOG00000010997.4
H0VI73
ATM
3
iEKPD-Cap-0162
ENSCPOG00000007001.4
H0V935
ATR
4
iEKPD-Cap-0266
ENSCPOG00000011641.4
H0VJM9
MTOR
5
iEKPD-Cap-g009
ENSCPOG00000027466.2
H0W5W2
Pi4ka
6
iEKPD-Cap-0246
ENSCPOG00000010635.4
H0VHB9
PI4KB
7
iEKPD-Cap-0001
ENSCPOG00000000024.4
H0UT05
PIK3C2A
8
iEKPD-Cap-g007
ENSCPOG00000005959.4
H0V6Q3
PIK3C2B
9
iEKPD-Cap-0102
ENSCPOG00000004375.4
H0V305
PIK3C3
10
iEKPD-Cap-0154
ENSCPOG00000006574.4
H0V837
PIK3CA
11
iEKPD-Cap-0023
ENSCPOG00000000884.4
H0UUY5
PIK3CB
12
iEKPD-Cap-0291
ENSCPOG00000012950.4
H0VMM3
PIK3CD
13
iEKPD-Cap-0308
ENSCPOG00000013433.4
H0VNQ9
PIK3CG
14
iEKPD-Cap-0323
ENSCPOG00000013944.4
H0VPX0
PRKDC
15
iEKPD-Cap-0283
ENSCPOG00000012606.4
H0VLT8
Smg1
16
iEKPD-Cap-0168
ENSCPOG00000007298.4
A0A286XFJ2
TRRAP