Chlorocebus sabaeus      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 16 genes.  Reviewed (0 or Unreviewed (16

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Chs-0057
ENSCSAG00000002971.1
A0A0D9S2I2
ATM
2
iEKPD-Chs-0274
ENSCSAG00000011281.1
A0A0D9RFU3
ATR
3
iEKPD-Chs-0007
ENSCSAG00000000790.1
A0A0D9S8M7
MTOR
4
iEKPD-Chs-g009
ENSCSAG00000013299.1
A0A0D9RLF8
PI4KA
5
iEKPD-Chs-0032
ENSCSAG00000001798.1
A0A0D9S5U1
PI4KB
6
iEKPD-Chs-g002
ENSCSAG00000004784.1
A0A0D9QXK4
PIK3C2A
7
iEKPD-Chs-g003
ENSCSAG00000014548.1
A0A0D9RPX8
PIK3C2B
8
iEKPD-Chs-0194
ENSCSAG00000008245.1
A0A0D9R729
PIK3C2G
9
iEKPD-Chs-0448
ENSCSAG00000017942.1
A0A0D9RZC3
PIK3C3
10
iEKPD-Chs-0319
ENSCSAG00000012948.1
A0A0D9RKI4
PIK3CA
11
iEKPD-Chs-0272
ENSCSAG00000011123.1
A0A0D9RFE7
PIK3CB
12
iEKPD-Chs-0006
ENSCSAG00000000770.1
A0A0D9S8P7
PIK3CD
13
iEKPD-Chs-0276
ENSCSAG00000011408.1
A0A0D9RG70
PIK3CG
14
iEKPD-Chs-0372
ENSCSAG00000014860.1
A0A0D9RQR8
PRKDC
15
iEKPD-Chs-0183
ENSCSAG00000007938.1
A0A0D9R6F7
SMG1
16
iEKPD-Chs-0446
ENSCSAG00000017767.1
A0A0D9RYV0
TRRAP