Dipodomys ordii      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 15 genes.  Reviewed (0 or Unreviewed (15

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Dio-0311
ENSDORG00000013688.2
A0A1S3ELJ1
Atm
2
iEKPD-Dio-0010
ENSDORG00000000389.2
A0A1S3GAR1
Atr
3
iEKPD-Dio-0436
ENSDORG00000028237.1
A0A1S3GQW0
LOC106000559
4
iEKPD-Dio-0088
ENSDORG00000003771.2
A0A1S3GF08
Mtor
5
iEKPD-Dio-g011
ENSDORG00000014233.2
A0A1S3GFE2
Pi4ka
6
iEKPD-Dio-0096
ENSDORG00000004011.2
A0A1S3F251
Pi4kb
7
iEKPD-Dio-g010
ENSDORG00000006835.2
A0A1S3F9F9
Pik3c2b
8
iEKPD-Dio-0345
ENSDORG00000014804.2
A0A1S3F1Z7
Pik3c3
9
iEKPD-Dio-0199
ENSDORG00000009553.2
A0A1S3GVM2
Pik3ca
10
iEKPD-Dio-0131
ENSDORG00000006339.2
A0A1S3GPF2
Pik3cb
11
iEKPD-Dio-0279
ENSDORG00000012407.2
A0A1S3GMG3
Pik3cd
12
iEKPD-Dio-0227
ENSDORG00000010565.2
A0A1S3GN09
Pik3cg
13
iEKPD-Dio-0100
ENSDORG00000004417.2
A0A1S3EMJ3
Prkdc
14
iEKPD-Dio-0126
ENSDORG00000006146.2
A0A1S3ESM9
Smg1
15
iEKPD-Dio-0376
ENSDORG00000016733.2
A0A1S3FS50
Trrap