Gasterosteus aculeatus      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 19 genes.  Reviewed (0 or Unreviewed (19

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Gaa-0041
ENSGACG00000001192.1
G3N8C1
2
iEKPD-Gaa-0052
ENSGACG00000001974.2
G3NB89
3
iEKPD-Gaa-0118
ENSGACG00000004193.1
G3NJK4
4
iEKPD-Gaa-0138
ENSGACG00000004869.1
G3NM95
5
iEKPD-Gaa-0141
ENSGACG00000004970.1
G3NMN3
6
iEKPD-Gaa-0161
ENSGACG00000005645.1
G3NQ48
7
iEKPD-Gaa-0172
ENSGACG00000006156.1
G3NS42
8
iEKPD-Gaa-0196
ENSGACG00000006738.1
G3NUC1
9
iEKPD-Gaa-0202
ENSGACG00000006981.2
G3NV93
10
iEKPD-Gaa-0212
ENSGACG00000007313.1
G3NWI2
11
iEKPD-Gaa-0266
ENSGACG00000009311.2
G3P402
12
iEKPD-Gaa-0291
ENSGACG00000009923.1
G3P687
13
iEKPD-Gaa-0312
ENSGACG00000010787.1
G3P9P8
14
iEKPD-Gaa-0535
ENSGACG00000019111.1
G3Q5X0
15
iEKPD-Gaa-0539
ENSGACG00000019186.1
G3Q661
16
iEKPD-Gaa-g007
ENSGACG00000000354.1
G3N589
17
iEKPD-Gaa-g013
ENSGACG00000004240.1
G3NJU1
18
iEKPD-Gaa-g005
ENSGACG00000010003.1
G3P6I7
19
iEKPD-Gaa-0465
ENSGACG00000016071.1
G3PUB9
PIK3CA