Lepisosteus oculatus      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 17 genes.  Reviewed (0 or Unreviewed (17

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Leo-0021
ENSLOCG00000001332.1
W5LZK6
2
iEKPD-Leo-0060
ENSLOCG00000002963.1
W5M537
3
iEKPD-Leo-0104
ENSLOCG00000004421.1
W5MA77
4
iEKPD-Leo-0142
ENSLOCG00000006046.1
W5MG32
5
iEKPD-Leo-0152
ENSLOCG00000006342.1
W5MH56
6
iEKPD-Leo-0169
ENSLOCG00000006919.1
W5MJ15
7
iEKPD-Leo-0176
ENSLOCG00000007061.1
W5MJK6
8
iEKPD-Leo-0202
ENSLOCG00000007924.1
W5MMM7
9
iEKPD-Leo-0212
ENSLOCG00000008445.1
W5MPG8
10
iEKPD-Leo-0221
ENSLOCG00000008702.1
W5MQE4
11
iEKPD-Leo-0233
ENSLOCG00000009397.1
W5MSW9
12
iEKPD-Leo-0359
ENSLOCG00000013171.1
W5N6H2
13
iEKPD-Leo-0444
ENSLOCG00000015829.1
W5NFS7
14
iEKPD-Leo-g009
ENSLOCG00000002180.1
W5M2N3
15
iEKPD-Leo-g013
ENSLOCG00000012102.1
W5N2P3
16
iEKPD-Leo-g006
ENSLOCG00000013570.1
W5N7Y0
17
iEKPD-Leo-g011
ENSLOCG00000001119.1
W5LYS0
PIK3CA