Loxodonta africana      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 16 genes.  Reviewed (0 or Unreviewed (16

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Loa-0279
ENSLAFG00000013536.4
G3TBJ0
2
iEKPD-Loa-0446
ENSLAFG00000028477.1
G3U7L3
3
iEKPD-Loa-0174
ENSLAFG00000008182.4
G3T1D5
ATM
4
iEKPD-Loa-0316
ENSLAFG00000015442.4
G3TF68
ATR
5
iEKPD-Loa-0325
ENSLAFG00000015635.4
G3TFL3
MTOR
6
iEKPD-Loa-g008
ENSLAFG00000002714.3
G3SR14
PI4KA
7
iEKPD-Loa-0115
ENSLAFG00000005706.3
G3SWR2
PI4KB
8
iEKPD-Loa-g005
ENSLAFG00000003710.3
G3SSX6
PIK3C2A
9
iEKPD-Loa-g007
ENSLAFG00000017033.3
G3TI33
PIK3C2B
10
iEKPD-Loa-0291
ENSLAFG00000014264.3
G3TCX7
PIK3C2G
11
iEKPD-Loa-0347
ENSLAFG00000016786.4
G3TXV6
PIK3C3
12
iEKPD-Loa-0062
ENSLAFG00000003071.4
G3SRN1
PIK3CA
13
iEKPD-Loa-0327
ENSLAFG00000015684.3
G3TFN6
PIK3CB
14
iEKPD-Loa-0029
ENSLAFG00000001501.3
G3SNN8
PIK3CD
15
iEKPD-Loa-0084
ENSLAFG00000004597.3
G3SUK0
PIK3CG
16
iEKPD-Loa-0387
ENSLAFG00000018634.4
G3TL75
SMG1