Macaca mulatta      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 16 genes.  Reviewed (0 or Unreviewed (16

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Mam-0061
ENSMMUG00000004153.3
F6ZIB3
ATM
2
iEKPD-Mam-0127
ENSMMUG00000007927.3
F7HT00
ATR
3
iEKPD-Mam-0337
ENSMMUG00000019325.3
H9ENS2
MTOR
4
iEKPD-Mam-g004
ENSMMUG00000022167.3
F6XII4
PI4KA
5
iEKPD-Mam-0215
ENSMMUG00000013170.3
A0A1D5R606
PI4KB
6
iEKPD-Mam-0403
ENSMMUG00000022548.3
A0A1D5QJY6
PIK3C2A
7
iEKPD-Mam-g012
ENSMMUG00000016563.3
H9ESL7
PIK3C2B
8
iEKPD-Mam-g003
ENSMMUG00000022174.3
A0A1D5Q461
PIK3C2G
9
iEKPD-Mam-0234
ENSMMUG00000014553.3
A0A1D5QE27
PIK3C3
10
iEKPD-Mam-0078
ENSMMUG00000005188.3
H9FVU5
PIK3CA
11
iEKPD-Mam-0146
ENSMMUG00000008666.3
F7F3S0
PIK3CB
12
iEKPD-Mam-0097
ENSMMUG00000006224.3
F7HLC7
PIK3CD
13
iEKPD-Mam-0185
ENSMMUG00000011385.2
F6W7C8
PIK3CG
14
iEKPD-Mam-0247
ENSMMUG00000015347.3
F6SP41
PRKDC
15
iEKPD-Mam-0400
ENSMMUG00000022441.3
A0A1D5R8H3
SMG1
16
iEKPD-Mam-0415
ENSMMUG00000023318.3
A0A1D5QYK9
TRRAP