Ornithorhynchus anatinus      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 16 genes.  Reviewed (0 or Unreviewed (16

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Ora-0078
ENSOANG00000003647.2
F7FJ30
2
iEKPD-Ora-0156
ENSOANG00000007262.1
F6PRV0
3
iEKPD-Ora-0315
ENSOANG00000012998.2
F6T4E5
4
iEKPD-Ora-0481
ENSOANG00000031995.1
K7E7U9
5
iEKPD-Ora-g028
ENSOANG00000002687.2
F6ZLJ3
6
iEKPD-Ora-g032
ENSOANG00000028791.1
K7EB94
7
iEKPD-Ora-0407
ENSOANG00000021332.2
F6S221
MTOR
8
iEKPD-Ora-g007
ENSOANG00000007685.2
F6VDD2
PIK3C2A
9
iEKPD-Ora-g024
ENSOANG00000013462.2
F7FB55
PIK3C2B
10
iEKPD-Ora-g018
ENSOANG00000003359.2
F6VAQ8
PIK3C3
11
iEKPD-Ora-0341
ENSOANG00000013922.2
F7DUD6
PIK3CA
12
iEKPD-Ora-0356
ENSOANG00000014698.3
F7GAP5
PIK3CB
13
iEKPD-Ora-g019
ENSOANG00000008173.3
F7EMH6
PIK3CD
14
iEKPD-Ora-g002
ENSOANG00000003171.2
F6ZP30
PIK3CG
15
iEKPD-Ora-0294
ENSOANG00000012229.2
F7FGW0
SMG1
16
iEKPD-Ora-0034
ENSOANG00000001930.3
F6Z5Q8
TRRAP