Otolemur garnettii      Atypical/PIKK


※ PIKK family introduction

    Phosphatidylinositol-3 kinase-related kinases (PIKKs) belong to atypical protein kinase group, which share little similarity of kinase catalytic domain. PIKKs family contains six members which are involved in responding to various stresses, including DNA damage, blocks in DNA replication, availability of nutrients and errors in mRNA splicing. The protein kinase domain of PIKKS, located in C-terminus, is always flanked by two conserved domain, known as FAT and FATC domain, which may interact and participate in kinase regulation (1). ATM, one of family member, is involved in responding to a specific type of DNA damage, such as DNA double strand breaks, and controls the cell-cycle progression by phosphorylates multiple substrates including p53 and Chk2. In addition, ATM also locates in cytoplasmic especially in neuronal or neuron-like cells (2). Ataxia telangiectasia and Rad3-related protein (ATR) acts as a DNA damage sensor. Activated by DNA lesions including base adducts, crosslinks, DSBs, and compounds that directly promote replication stress such as hydroxyurea and aphidicolin and phosphorylates multiple substrates to control the DNA replication and mitosis (3). mTOR is a serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. mTOR is regulated by dynamic changes in cellular localization (3). Transformation/transcription domain-associated protein (TRRAP) is also structurally related to the PIKK family. TRRAP proteins (Tra1 in budding yeast) are common components of many histone acetyltransferase (HAT) complexes, and mediate a variety of cellular processes by recruiting HAT complexes to chromatin (4).

Reference
1. Lempiainen, H. and Halazonetis, T.D. (2009) Emerging common themes in regulation of PIKKs and PI3Ks. EMBO J, 28, 3067-3073. PMID: 19779456
2. Yang, D.Q., Halaby, M.J., Li, Y., Hibma, J.C. and Burn, P. (2011) Cytoplasmic ATM protein kinase: an emerging therapeutic target for diabetes, cancer and neuronal degeneration. Drug Discov Today, 16, 332-338. PMID: 21315178
3. Lovejoy, C.A. and Cortez, D. (2009) Common mechanisms of PIKK regulation. DNA Repair (Amst), 8, 1004-1008. PMID: 19464237
4. Kanoh, J. and Yanagida, M. (2007) Tel2: a common partner of PIK-related kinases and a link between DNA checkpoint and nutritional response? Genes Cells, 12, 1301-1304. PMID: 18076567


There are 16 genes.  Reviewed (0 or Unreviewed (16

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Otg-0057
ENSOGAG00000002623.2
H0WL50
2
iEKPD-Otg-0090
ENSOGAG00000004047.2
H0WP19
3
iEKPD-Otg-0405
ENSOGAG00000017247.2
H0XH60
ATM
4
iEKPD-Otg-0003
ENSOGAG00000000171.2
H0WFW3
ATR
5
iEKPD-Otg-0326
ENSOGAG00000013669.2
H0X9K8
MTOR
6
iEKPD-Otg-g003
ENSOGAG00000000663.2
H0WGY1
PI4KA
7
iEKPD-Otg-0181
ENSOGAG00000008117.2
H0WXR1
PI4KB
8
iEKPD-Otg-0045
ENSOGAG00000002129.2
H0WK36
PIK3C2A
9
iEKPD-Otg-g002
ENSOGAG00000011912.2
H0X5S8
PIK3C2B
10
iEKPD-Otg-0306
ENSOGAG00000012994.2
H0X862
PIK3C3
11
iEKPD-Otg-0145
ENSOGAG00000006592.2
H0WUI6
PIK3CA
12
iEKPD-Otg-0367
ENSOGAG00000015284.2
H0XCZ2
PIK3CD
13
iEKPD-Otg-0308
ENSOGAG00000013097.2
H0X8C9
PIK3CG
14
iEKPD-Otg-0008
ENSOGAG00000000362.2
H0WG96
PRKDC
15
iEKPD-Otg-0312
ENSOGAG00000013206.2
H0X8L7
SMG1
16
iEKPD-Otg-0014
ENSOGAG00000000643.2
H0WGW3
TRRAP