Arabidopsis lyrata      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 45 genes.  Reviewed (0 or Unreviewed (45

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Arl-0243
fgenesh1_pm.C_scaffold_3000097
D7LAJ2
ARALYDRAFT_317081
2
iEKPD-Arl-0295
fgenesh1_pm.C_scaffold_7002776
D7MJM0
ARALYDRAFT_330549
3
iEKPD-Arl-0204
fgenesh1_pg.C_scaffold_7000184
D7M984
ARALYDRAFT_353011
4
iEKPD-Arl-0308
fgenesh2_kg.1__115__AT1G01140.3
D7KQA9
ARALYDRAFT_470161
5
iEKPD-Arl-0317
fgenesh2_kg.1__1373__AT1G12680.1
D7KPA4
ARALYDRAFT_471419
6
iEKPD-Arl-0429
fgenesh2_kg.2__367__AT1G60940.1
D7KW70
ARALYDRAFT_475237
7
iEKPD-Arl-0500
fgenesh2_kg.3__410__AT3G04530.1
D7L268
ARALYDRAFT_477709
8
iEKPD-Arl-0539
fgenesh2_kg.4__234__AT2G23030.1
D7LEM3
ARALYDRAFT_481174
9
iEKPD-Arl-0555
fgenesh2_kg.4__423__AT2G25090.1
D7LK43
ARALYDRAFT_481363
10
iEKPD-Arl-0514
fgenesh2_kg.4__1008__AT2G30360.1
D7LBM9
ARALYDRAFT_481948
11
iEKPD-Arl-0526
fgenesh2_kg.4__1919__AT2G38490.1
D7LBN6
ARALYDRAFT_482859
12
iEKPD-Arl-0618
fgenesh2_kg.5__675__AT3G29160.2
D7LNU4
ARALYDRAFT_484683
13
iEKPD-Arl-0577
fgenesh2_kg.5__1391__AT3G50500.1
D7LTF5
ARALYDRAFT_485399
14
iEKPD-Arl-0645
fgenesh2_kg.6__20__AT5G01820.1
D7M6F0
ARALYDRAFT_486886
15
iEKPD-Arl-0648
fgenesh2_kg.6__2163__AT5G21222.1
D7M0Q9
ARALYDRAFT_489029
16
iEKPD-Arl-0649
fgenesh2_kg.6__2165__AT5G21326.1
D7M0R2
ARALYDRAFT_489031
17
iEKPD-Arl-0757
fgenesh2_kg.7__713__AT4G33950.1
D7MFT5
ARALYDRAFT_491280
18
iEKPD-Arl-0797
fgenesh2_kg.8__217__AT5G45810.1
D7MTB0
ARALYDRAFT_494401
19
iEKPD-Arl-0157
Al_scaffold_0060_2
D7MW30
ARALYDRAFT_655337
20
iEKPD-Arl-0096
Al_scaffold_0006_2411
D7M3U6
ARALYDRAFT_662346
21
iEKPD-Arl-0035
Al_scaffold_0002_2538
D7KV96
ARALYDRAFT_677388
22
iEKPD-Arl-0834
scaffold_101184.1
D7KLL0
ARALYDRAFT_888390
23
iEKPD-Arl-0853
scaffold_104434.1
D7KC33
ARALYDRAFT_891640
24
iEKPD-Arl-0897
scaffold_301217.1
D7L910
ARALYDRAFT_897247
25
iEKPD-Arl-0934
scaffold_402002.1
D7LGY1
ARALYDRAFT_902501
26
iEKPD-Arl-0957
scaffold_501379.1
D7LNN2
ARALYDRAFT_905675
27
iEKPD-Arl-0983
scaffold_503054.1
D7LW65
ARALYDRAFT_907350
28
iEKPD-Arl-0988
scaffold_600012.1
D7M6D9
ARALYDRAFT_907955
29
iEKPD-Arl-0999
scaffold_600896.1
D7M1G0
ARALYDRAFT_908839
30
iEKPD-Arl-1049
scaffold_702549.1
D7MCP2
ARALYDRAFT_914807
31
iEKPD-Arl-1058
scaffold_703411.1
D7MHS2
ARALYDRAFT_915669
32
iEKPD-Arl-1063
scaffold_704100.1
D7MJL8
ARALYDRAFT_916358
33
iEKPD-Arl-1080
scaffold_803059.1
D7MPR2
ARALYDRAFT_919659
34
iEKPD-Arl-1085
scaffold_803430.1
D7MLE7
ARALYDRAFT_920030
35
iEKPD-Arl-0462
fgenesh2_kg.3__1928__AT3G17510.1
D7L792
CIPK1
36
iEKPD-Arl-0780
fgenesh2_kg.8__1771__AT5G58380.1
D7MQC6
CIPK10
37
iEKPD-Arl-0989
scaffold_600023.1
D7M6F1
CIPK15
38
iEKPD-Arl-0997
scaffold_600700.1
D7LZX2
CIPK2
39
iEKPD-Arl-0796
fgenesh2_kg.8__216__AT5G45820.1
D7MTA9
CIPK20
40
iEKPD-Arl-1071
scaffold_802342.1
D7MNC1
CIPK21
41
iEKPD-Arl-0564
fgenesh2_kg.4__636__AT2G26980.3
D7LFH3
CIPK3
42
iEKPD-Arl-1055
scaffold_703150.1
D7MH03
CIPK4
43
iEKPD-Arl-0626
fgenesh2_kg.6__1058__AT5G10930.1
D7M3J9
CIPK5
44
iEKPD-Arl-0474
fgenesh2_kg.3__2511__AT3G23000.1
D7L2H9
CIPK7
45
iEKPD-Arl-1040
scaffold_701889.1
D7M8U4
CIPK8