Brachypodium distachyon      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 56 genes.  Reviewed (0 or Unreviewed (56

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Brd-0447
BRADI2G18970
I1HHA5
2
iEKPD-Brd-0457
BRADI2G20500
I1HHV4
3
iEKPD-Brd-0490
BRADI2G31050
I1HKK9
4
iEKPD-Brd-0491
BRADI2G31060
I1HKL0
5
iEKPD-Brd-0871
BRADI4G00237
I1IFY8
6
iEKPD-Brd-0276
BRADI1G58400
I1H421
BRADI_1g58400v3
7
iEKPD-Brd-0979
BRADI4G22580
I1IML8
BRADI_4g22580v3
8
iEKPD-Brd-0148
BRADI1G28520
I1GUQ1
LOC100820854
9
iEKPD-Brd-0079
BRADI1G17250
I1GQZ8
LOC100821473
10
iEKPD-Brd-0289
BRADI1G60720
I1H4V8
LOC100822365
11
iEKPD-Brd-0295
BRADI1G63080
I1H5Q0
LOC100822784
12
iEKPD-Brd-0582
BRADI2G50430
I1HRS6
LOC100823165
13
iEKPD-Brd-0097
BRADI1G21310
I1GSA7
LOC100823438
14
iEKPD-Brd-0583
BRADI2G50440
I1HRS7
LOC100823469
15
iEKPD-Brd-0418
BRADI2G11220
I1HEQ3
LOC100823874
16
iEKPD-Brd-0092
BRADI1G20160
I1GRX5
LOC100823960
17
iEKPD-Brd-0894
BRADI4G02557
I1IGR4
LOC100824845
18
iEKPD-Brd-0073
BRADI1G14200
I1GQ59
LOC100825483
19
iEKPD-Brd-0059
BRADI1G11340
I1GP71
LOC100826504
20
iEKPD-Brd-0763
BRADI3G33690
I1I692
LOC100826573
21
iEKPD-Brd-0037
BRADI1G07620
I1GMZ0
LOC100827011
22
iEKPD-Brd-0610
BRADI2G56267
I1HTT1
LOC100828370
23
iEKPD-Brd-1080
BRADI4G44460
I1IV15
LOC100828546
24
iEKPD-Brd-0399
BRADI2G06550
I1HD54
LOC100829174
25
iEKPD-Brd-0660
BRADI3G04630
I1HXG9
LOC100830445
26
iEKPD-Brd-0074
BRADI1G14720
I1GQB4
LOC100830593
27
iEKPD-Brd-0665
BRADI3G05790
I1HXW1
LOC100830633
28
iEKPD-Brd-0084
BRADI1G17820
I1GR61
LOC100830701
29
iEKPD-Brd-0996
BRADI4G25880
I1INL3
LOC100831178
30
iEKPD-Brd-0803
BRADI3G45460
I1IAE4
LOC100831269
31
iEKPD-Brd-1119
BRADI5G10300
I1IXT7
LOC100831909
32
iEKPD-Brd-0496
BRADI2G32587
I1HKX5
LOC100832235
33
iEKPD-Brd-0143
BRADI1G27750
I1GUF7
LOC100832599
34
iEKPD-Brd-0307
BRADI1G65630
I1H6L6
LOC100832804
35
iEKPD-Brd-0083
BRADI1G17810
I1GR60
LOC100833327
36
iEKPD-Brd-0774
BRADI3G36910
I1I7E6
LOC100833415
37
iEKPD-Brd-0850
BRADI3G54760
I1IDP7
LOC100835740
38
iEKPD-Brd-0351
BRADI1G76760
I1HA93
LOC100836113
39
iEKPD-Brd-0455
BRADI2G19970
I1HHN8
LOC100836554
40
iEKPD-Brd-1029
BRADI4G32590
I1IQW2
LOC100836584
41
iEKPD-Brd-0574
BRADI2G48830
I1HR67
LOC100836644
42
iEKPD-Brd-0186
BRADI1G36520
I1GXH6
LOC100838159
43
iEKPD-Brd-0824
BRADI3G49220
I1IBR2
LOC100838618
44
iEKPD-Brd-0897
BRADI4G03220
I1IH10
LOC100839347
45
iEKPD-Brd-1000
BRADI4G26410
I1INS5
LOC100839449
46
iEKPD-Brd-0465
BRADI2G22210
I1HIE2
LOC100839499
47
iEKPD-Brd-0605
BRADI2G53670
I1HSY2
LOC100839810
48
iEKPD-Brd-1021
BRADI4G30380
I1IQ60
LOC100840059
49
iEKPD-Brd-1022
BRADI4G30390
I1IQ61
LOC100840569
50
iEKPD-Brd-0780
BRADI3G38440
I1I7X9
LOC100842161
51
iEKPD-Brd-0193
BRADI1G38340
I1GY53
LOC100843416
52
iEKPD-Brd-1202
BRADI5G27430
I1J3S8
LOC100843625
53
iEKPD-Brd-0467
BRADI2G22350
I1HIF9
LOC100844867
54
iEKPD-Brd-0301
BRADI1G64010
I1H623
LOC100845430
55
iEKPD-Brd-0398
BRADI2G06530
I1HD52
LOC100845888
56
iEKPD-Brd-0533
BRADI2G40500
I1HND3
LOC100846102