Brassica rapa      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 90 genes.  Reviewed (0 or Unreviewed (90

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Brr-0004
Bra000066
M4C788
2
iEKPD-Brr-0051
Bra001022
M4C9Z3
3
iEKPD-Brr-0075
Bra001665
M4CBT5
4
iEKPD-Brr-0106
Bra002367
M4CDT6
5
iEKPD-Brr-0107
Bra002369
M4CDT8
6
iEKPD-Brr-0109
Bra002472
M4CE41
7
iEKPD-Brr-0127
Bra002654
M4CEM3
8
iEKPD-Brr-0131
Bra002712
M4CET0
9
iEKPD-Brr-0171
Bra003650
M4CHG7
10
iEKPD-Brr-0234
Bra005103
M4CLL6
11
iEKPD-Brr-0242
Bra005446
M4CMK8
12
iEKPD-Brr-0243
Bra005447
M4CMK9
13
iEKPD-Brr-0253
Bra005663
M4CN75
14
iEKPD-Brr-0264
Bra006010
M4CP72
15
iEKPD-Brr-0303
Bra006809
M4CRG8
16
iEKPD-Brr-0376
Bra008398
M4CW01
17
iEKPD-Brr-0398
Bra009003
M4CXQ6
18
iEKPD-Brr-0411
Bra009293
M4CYJ6
19
iEKPD-Brr-0412
Bra009294
M4CYJ7
20
iEKPD-Brr-0414
Bra009354
M4CYQ7
21
iEKPD-Brr-0442
Bra010095
M4D0U6
22
iEKPD-Brr-0446
Bra010263
M4D1B4
23
iEKPD-Brr-0460
Bra010783
M4D2T0
24
iEKPD-Brr-0464
Bra010841
M4D2Y8
25
iEKPD-Brr-0478
Bra011236
M4D432
26
iEKPD-Brr-0493
Bra011481
M4D4S6
27
iEKPD-Brr-0506
Bra011815
M4D5Q8
28
iEKPD-Brr-0516
Bra012113
M4D6K4
29
iEKPD-Brr-0537
Bra012897
M4D8T7
30
iEKPD-Brr-0554
Bra013246
M4D9T6
31
iEKPD-Brr-0560
Bra013340
M4DA30
32
iEKPD-Brr-0592
Bra013799
M4DBD9
33
iEKPD-Brr-0601
Bra014122
M4DCA9
34
iEKPD-Brr-0602
Bra014124
M4DCB1
35
iEKPD-Brr-0605
Bra014171
M4DCF7
36
iEKPD-Brr-0637
Bra014875
M4DEF4
37
iEKPD-Brr-0713
Bra016760
M4DJT2
38
iEKPD-Brr-0737
Bra017094
M4DKR3
39
iEKPD-Brr-0750
Bra017615
M4DM83
40
iEKPD-Brr-0784
Bra018319
M4DP78
41
iEKPD-Brr-0788
Bra018417
M4DPH6
42
iEKPD-Brr-0798
Bra018609
M4DQ18
43
iEKPD-Brr-0801
Bra018716
M4DQC3
44
iEKPD-Brr-0852
Bra019780
M4DTD7
45
iEKPD-Brr-0864
Bra019889
M4DTP6
46
iEKPD-Brr-0865
Bra019890
M4DTP7
47
iEKPD-Brr-0878
Bra020156
M4DUG3
48
iEKPD-Brr-0880
Bra020241
M4DUP8
49
iEKPD-Brr-0894
Bra020371
M4DV28
50
iEKPD-Brr-0902
Bra020542
M4DVJ8
51
iEKPD-Brr-0922
Bra020996
M4DWV0
52
iEKPD-Brr-0940
Bra021482
M4DY86
53
iEKPD-Brr-0946
Bra021628
M4DYN2
54
iEKPD-Brr-0956
Bra021897
M4DZF0
55
iEKPD-Brr-0960
Bra021992
M4DZP5
56
iEKPD-Brr-0967
Bra022219
M4E0C2
57
iEKPD-Brr-0982
Bra022794
M4E1Z4
58
iEKPD-Brr-1012
Bra023777
M4E4S3
59
iEKPD-Brr-1022
Bra024032
M4E5H8
60
iEKPD-Brr-1058
Bra025051
M4E8E5
61
iEKPD-Brr-1059
Bra025052
M4E8E6
62
iEKPD-Brr-1074
Bra025379
M4E9C3
63
iEKPD-Brr-1083
Bra025613
M4EA06
64
iEKPD-Brr-1130
Bra026959
M4EDU9
65
iEKPD-Brr-1147
Bra027311
M4EEU9
66
iEKPD-Brr-1184
Bra028245
M4EHI0
67
iEKPD-Brr-1207
Bra028709
M4EIU4
68
iEKPD-Brr-1212
Bra028911
M4EJE5
69
iEKPD-Brr-1213
Bra028912
M4EJE6
70
iEKPD-Brr-1238
Bra029512
M4EL45
71
iEKPD-Brr-1287
Bra030737
M4EPL7
72
iEKPD-Brr-1314
Bra031475
M4ERP9
73
iEKPD-Brr-1327
Bra031740
M4ESG1
74
iEKPD-Brr-1341
Bra032042
M4ETB2
75
iEKPD-Brr-1355
Bra032188
M4ETQ6
76
iEKPD-Brr-1356
Bra032246
M4ETW4
77
iEKPD-Brr-1361
Bra032374
M4EU92
78
iEKPD-Brr-1370
Bra032622
M4EUY9
79
iEKPD-Brr-1378
Bra032989
M4EW06
80
iEKPD-Brr-1381
Bra033088
M4EWA4
81
iEKPD-Brr-1387
Bra033282
M4EWU7
82
iEKPD-Brr-1404
Bra033893
M4EYK1
83
iEKPD-Brr-1425
Bra034315
M4EZS2
84
iEKPD-Brr-1438
Bra035026
M4F1S9
85
iEKPD-Brr-1514
Bra036868
M4F708
86
iEKPD-Brr-1515
Bra036870
M4F710
87
iEKPD-Brr-1541
Bra037549
M4F8Y6
88
iEKPD-Brr-1573
Bra038652
M4FC36
89
iEKPD-Brr-1594
Bra039146
M4FDH5
90
iEKPD-Brr-1638
Bra040186
M4FGF8