Oryza barthii      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 65 genes.  Reviewed (0 or Unreviewed (65

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Orh-0079
OBART01G18720
A0A0D3EPW0
2
iEKPD-Orh-0154
OBART01G38730
A0A0D3EWS7
3
iEKPD-Orh-0211
OBART02G05910
A0A0D3F1H4
4
iEKPD-Orh-0251
OBART02G17160
A0A0D3F5B6
5
iEKPD-Orh-0276
OBART02G24690
A0A0D3F7T7
6
iEKPD-Orh-0300
OBART02G30610
A0A0D3F9U9
7
iEKPD-Orh-0315
OBART02G36600
A0A0D3FBU0
8
iEKPD-Orh-0338
OBART03G02150
A0A0D3FDA2
9
iEKPD-Orh-0373
OBART03G13410
A0A0D3FH66
10
iEKPD-Orh-0378
OBART03G15340
A0A0D3FHU1
11
iEKPD-Orh-0404
OBART03G25910
A0A0D3FL87
12
iEKPD-Orh-0405
OBART03G26880
A0A0D3FLJ1
13
iEKPD-Orh-0420
OBART03G31620
A0A0D3FN56
14
iEKPD-Orh-0438
OBART03G35230
A0A0D3FPG1
15
iEKPD-Orh-0551
OBART04G18800
A0A0D3FXZ5
16
iEKPD-Orh-0655
OBART05G12180
A0A0D3G677
17
iEKPD-Orh-0666
OBART05G17680
A0A0D3G813
18
iEKPD-Orh-0676
OBART05G20160
A0A0D3G8Y0
19
iEKPD-Orh-0678
OBART05G20360
A0A0D3G900
20
iEKPD-Orh-0695
OBART05G24770
A0A0D3GAG4
21
iEKPD-Orh-0787
OBART06G20470
A0A0D3GIH6
22
iEKPD-Orh-0846
OBART07G03260
A0A0D3GMC1
23
iEKPD-Orh-0856
OBART07G06170
A0A0D3GNB1
24
iEKPD-Orh-0922
OBART07G22640
A0A0D3GTP9
25
iEKPD-Orh-0927
OBART07G23520
A0A0D3GU03
26
iEKPD-Orh-0935
OBART07G26310
A0A0D3GUY6
27
iEKPD-Orh-0981
OBART08G16150
A0A0D3H0Q8
28
iEKPD-Orh-0992
OBART08G19600
A0A0D3H1V6
29
iEKPD-Orh-1056
OBART09G13340
A0A0D3H7V6
30
iEKPD-Orh-1108
OBART10G02700
A0A0D3HBA3
31
iEKPD-Orh-1136
OBART10G10280
A0A0D3HDS0
32
iEKPD-Orh-1137
OBART10G10290
A0A0D3HDS1
33
iEKPD-Orh-1143
OBART10G11820
A0A0D3HE84
34
iEKPD-Orh-1169
OBART10G18810
A0A0D3HGP9
35
iEKPD-Orh-1181
OBART11G02010
A0A0D3HHU1
36
iEKPD-Orh-1183
OBART11G02110
A0A0D3HHV3
37
iEKPD-Orh-1280
OBART12G01900
A0A0D3HR28
38
iEKPD-Orh-1313
OBART12G13970
A0A0D3HV47
39
iEKPD-Orh-1318
OBART12G18160
A0A0D3HWI4
40
iEKPD-Orh-0148
OBART01G35630
A0A0D3EVP4
107275263
41
iEKPD-Orh-0675
OBART05G20110
A0A0D3G8X5
107277347
42
iEKPD-Orh-0061
OBART01G12220
A0A0D3EMR6
4325161
43
iEKPD-Orh-0132
OBART01G31660
A0A0D3EU91
4325611
44
iEKPD-Orh-0133
OBART01G31670
A0A0D3EU92
4325613
45
iEKPD-Orh-0042
OBART01G06790
A0A0D3EKX0
4327092
46
iEKPD-Orh-0043
OBART01G06810
A0A0D3EKX2
4327093
47
iEKPD-Orh-0206
OBART02G04660
A0A0D3F110
4328383
48
iEKPD-Orh-0258
OBART02G20140
A0A0D3F694
4329630
49
iEKPD-Orh-0386
OBART03G16730
A0A0D3FI97
4332786
50
iEKPD-Orh-0391
OBART03G20020
A0A0D3FJC0
4333017
51
iEKPD-Orh-0531
OBART04G13060
A0A0D3FW08
4335877
52
iEKPD-Orh-0603
OBART04G30680
A0A0D3G229
4337502
53
iEKPD-Orh-0614
OBART05G02510
A0A0D3G2Y9
4337736
54
iEKPD-Orh-0629
OBART05G06870
A0A0D3G4E2
4338083
55
iEKPD-Orh-0654
OBART05G12140
A0A0D3G671
4338445
56
iEKPD-Orh-0688
OBART05G22580
A0A0D3G9Q8
4339306
57
iEKPD-Orh-0693
OBART05G23640
A0A0D3GA30
4339410
58
iEKPD-Orh-0761
OBART06G17750
A0A0D3GHL0
4341236
59
iEKPD-Orh-0936
OBART07G26320
A0A0D3GUY7
4344287
60
iEKPD-Orh-0940
OBART07G26890
A0A0D3GV65
4344342
61
iEKPD-Orh-0987
OBART08G18550
A0A0D3H1I1
4345873
62
iEKPD-Orh-1050
OBART09G10410
A0A0D3H6X1
4347071
63
iEKPD-Orh-1175
OBART11G00920
A0A0D3HHE7
4349594
64
iEKPD-Orh-1276
OBART12G00670
A0A0D3HQM1
4351307
65
iEKPD-Orh-1317
OBART12G17230
A0A0D3HW70
4352660