Oryza glaberrima      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 55 genes.  Reviewed (0 or Unreviewed (55

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Orz-0068
ORGLA01G0153000
I1NNU0
2
iEKPD-Orz-0134
ORGLA01G0325600
I1NTR6
3
iEKPD-Orz-0191
ORGLA02G0054500
I1NXT9
4
iEKPD-Orz-0224
ORGLA02G0150300
I1P0J7
5
iEKPD-Orz-0226
ORGLA02G0151400
I1P0K8
6
iEKPD-Orz-0245
ORGLA02G0213800
I1P2D2
7
iEKPD-Orz-0265
ORGLA02G0261400
I1P3Q8
8
iEKPD-Orz-0279
ORGLA02G0318400
I1P5C8
9
iEKPD-Orz-0301
ORGLA02G0359900
I1PX83
10
iEKPD-Orz-0310
ORGLA03G0019200
I1P746
11
iEKPD-Orz-0348
ORGLA03G0146900
I1PAS3
12
iEKPD-Orz-0374
ORGLA03G0240100
I1PDF5
13
iEKPD-Orz-0375
ORGLA03G0250300
I1PDQ7
14
iEKPD-Orz-0388
ORGLA03G0292800
I1PEY2
15
iEKPD-Orz-0401
ORGLA03G0322600
I1PFT0
16
iEKPD-Orz-0436
ORGLA03G0415100
I1PIF5
17
iEKPD-Orz-0614
ORGLA05G0103300
I1PUI5
18
iEKPD-Orz-0624
ORGLA05G0151800
I1PVX0
19
iEKPD-Orz-0632
ORGLA05G0175400
I1PWK6
20
iEKPD-Orz-0633
ORGLA05G0175700
I1PWK9
21
iEKPD-Orz-0635
ORGLA05G0177800
I1PWN0
22
iEKPD-Orz-0655
ORGLA05G0213000
I1PXN2
23
iEKPD-Orz-0793
ORGLA07G0027900
I1Q837
24
iEKPD-Orz-0803
ORGLA07G0051600
I1Q8S4
25
iEKPD-Orz-0847
ORGLA07G0175000
I1QCA8
26
iEKPD-Orz-0858
ORGLA07G0206600
I1QD74
27
iEKPD-Orz-0894
ORGLA07G0263300
I1QEU1
28
iEKPD-Orz-0932
ORGLA08G0141000
I1QJ09
29
iEKPD-Orz-0992
ORGLA09G0076700
I1QNY8
30
iEKPD-Orz-0997
ORGLA09G0100800
I1QPM9
31
iEKPD-Orz-1070
ORGLA10G0089100
I1QUK8
32
iEKPD-Orz-1071
ORGLA10G0089200
I1QUK9
33
iEKPD-Orz-1085
ORGLA10G0139500
I1QW12
34
iEKPD-Orz-1099
ORGLA11G0018500
I1QXE3
35
iEKPD-Orz-1184
ORGLA12G0017100
I1R3R5
36
iEKPD-Orz-0128
ORGLA01G0294300
I1NSV3
107275263
37
iEKPD-Orz-0054
ORGLA01G0103100
I1NME1
4325161
38
iEKPD-Orz-0115
ORGLA01G0257000
I1NRT0
4325613
39
iEKPD-Orz-0186
ORGLA02G0043000
I1NXH4
4328383
40
iEKPD-Orz-0231
ORGLA02G0172800
I1P172
4329630
41
iEKPD-Orz-0356
ORGLA03G0160200
I1PB56
4332786
42
iEKPD-Orz-0361
ORGLA03G0186900
I1PBX3
4333017
43
iEKPD-Orz-0490
ORGLA04G0100400
I1PLD5
4335877
44
iEKPD-Orz-0564
ORGLA04G0270400
I1PR85
4337502
45
iEKPD-Orz-0590
ORGLA05G0059500
I1PT97
4338083
46
iEKPD-Orz-0613
ORGLA05G0102600
I1PUH8
4338445
47
iEKPD-Orz-0710
ORGLA06G0148200
I1Q2W9
4341236
48
iEKPD-Orz-0726
ORGLA06G0169100
I1Q3H8
4341477
49
iEKPD-Orz-0857
ORGLA07G0206500
I1QD73
4344285
50
iEKPD-Orz-0862
ORGLA07G0212800
I1QDD6
4344342
51
iEKPD-Orz-0937
ORGLA08G0161100
I1QJL0
4345873
52
iEKPD-Orz-0991
ORGLA09G0076600
I1QNY7
4347071
53
iEKPD-Orz-1093
ORGLA11G0011100
I1QX69
4349594
54
iEKPD-Orz-1177
ORGLA12G0005500
I1R3E9
4351307
55
iEKPD-Orz-1217
ORGLA12G0148100
I1R7H5
4352660