Oryza longistaminata      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 55 genes.  Reviewed (0 or Unreviewed (55

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Orl-0001
AMDW01012205.1_FG001
2
iEKPD-Orl-0038
AMDW01039591.1_FG001
3
iEKPD-Orl-0053
AMDW01040693.1_FG001
4
iEKPD-Orl-0078
AMDW01137297.1_FG001
5
iEKPD-Orl-0087
KN538682.1_FG074
6
iEKPD-Orl-0123
KN538692.1_FG035
7
iEKPD-Orl-0145
KN538695.1_FG040
8
iEKPD-Orl-0146
KN538695.1_FG043
9
iEKPD-Orl-0184
KN538713.1_FG102
10
iEKPD-Orl-0185
KN538713.1_FG106
11
iEKPD-Orl-0202
KN538723.1_FG060
12
iEKPD-Orl-0232
KN538754.1_FG007
13
iEKPD-Orl-0255
KN538770.1_FG041
14
iEKPD-Orl-0260
KN538774.1_FG009
15
iEKPD-Orl-0327
KN538837.1_FG041
16
iEKPD-Orl-0429
KN538922.1_FG025
17
iEKPD-Orl-0430
KN538924.1_FG002
18
iEKPD-Orl-0454
KN538961.1_FG013
19
iEKPD-Orl-0478
KN539009.1_FG017
20
iEKPD-Orl-0522
KN539070.1_FG002
21
iEKPD-Orl-0537
KN539094.1_FG004
22
iEKPD-Orl-0546
KN539104.1_FG003
23
iEKPD-Orl-0578
KN539151.1_FG011
24
iEKPD-Orl-0579
KN539152.1_FG007
25
iEKPD-Orl-0632
KN539252.1_FG010
26
iEKPD-Orl-0667
KN539302.1_FG003
27
iEKPD-Orl-0694
KN539337.1_FG003
28
iEKPD-Orl-0782
KN539480.1_FG002
29
iEKPD-Orl-0850
KN539612.1_FG005
30
iEKPD-Orl-0859
KN539637.1_FG010
31
iEKPD-Orl-0881
KN539676.1_FG008
32
iEKPD-Orl-0945
KN539835.1_FG005
33
iEKPD-Orl-0946
KN539836.1_FG003
34
iEKPD-Orl-0949
KN539836.1_FG010
35
iEKPD-Orl-0957
KN539863.1_FG001
36
iEKPD-Orl-1008
KN539994.1_FG004
37
iEKPD-Orl-1029
KN540073.1_FG006
38
iEKPD-Orl-1035
KN540096.1_FG004
39
iEKPD-Orl-1047
KN540137.1_FG005
40
iEKPD-Orl-1065
KN540170.1_FG002
41
iEKPD-Orl-1112
KN540335.1_FG003
42
iEKPD-Orl-1130
KN540400.1_FG002
43
iEKPD-Orl-1133
KN540402.1_FG003
44
iEKPD-Orl-1289
KN541064.1_FG003
45
iEKPD-Orl-1301
KN541102.1_FG004
46
iEKPD-Orl-1351
KN541370.1_FG001
47
iEKPD-Orl-1385
KN541572.1_FG001
48
iEKPD-Orl-1446
KN541963.1_FG001
49
iEKPD-Orl-1482
KN542256.1_FG001
50
iEKPD-Orl-1498
KN542349.1_FG003
51
iEKPD-Orl-1536
KN543040.1_FG003
52
iEKPD-Orl-1549
KN543352.1_FG001
53
iEKPD-Orl-1589
KN546557.1_FG001
54
iEKPD-Orl-g009
KN541620.1_FG002
55
iEKPD-Orl-0102
KN538686.1_FG175
S5CGC2
CK1