Populus trichocarpa      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 60 genes.  Reviewed (0 or Unreviewed (60

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Pot-0567
POPTR_0005s14090
2
iEKPD-Pot-0568
POPTR_0005s14100
3
iEKPD-Pot-0872
POPTR_0008s16640
4
iEKPD-Pot-0992
POPTR_0010s08950
A0MNJ7
CIPK10
5
iEKPD-Pot-1126
POPTR_0011s07240
A0MNJ8
CIPK11
6
iEKPD-Pot-1342
POPTR_0014s10000
A0MNK0
CIPK13
7
iEKPD-Pot-1307
POPTR_0013s15200
A0MNK1
CIPK14
8
iEKPD-Pot-1738
POPTR_0019s14860
A0MNK2
CIPK15
9
iEKPD-Pot-1306
POPTR_0013s15160
A0MNK3
CIPK16
10
iEKPD-Pot-1125
POPTR_0011s07230
A0MNK4
CIPK17
11
iEKPD-Pot-0410
POPTR_0004s05700
A0MNK6
CIPK19
12
iEKPD-Pot-1484
POPTR_0016s14140
A0MNK7
CIPK21
13
iEKPD-Pot-1483
POPTR_0016s14100
A0MNK8
CIPK22
14
iEKPD-Pot-1645
POPTR_0018s13050
A0MNL2
CIPK26
15
iEKPD-Pot-0078
POPTR_0001s23030
A0MNJ1
CIPK3
16
iEKPD-Pot-0900
POPTR_0009s02610
A0MNJ2
CIPK4
17
iEKPD-Pot-0869
POPTR_0008s16010
A0MNJ3
CIPK5
18
iEKPD-Pot-1641
POPTR_0018s11770
A0MNJ4
CIPK7
19
iEKPD-Pot-0019
POPTR_0001s04790
B9GLK2
POPTR_0001s04790g
20
iEKPD-Pot-0226
POPTR_0002s09990
B9GUZ0
POPTR_0002s09990g
21
iEKPD-Pot-0228
POPTR_0002s10970
B9GN67
POPTR_0002s10970g
22
iEKPD-Pot-0280
POPTR_0003s01110
B9GZG8
POPTR_0003s01110g
23
iEKPD-Pot-0297
POPTR_0003s08240
B9N2V2
POPTR_0003s08240g
24
iEKPD-Pot-0334
POPTR_0003s18030
B9GVK5
POPTR_0003s18030g
25
iEKPD-Pot-0352
POPTR_0003s21580
U5GNA8
POPTR_0003s21580g
26
iEKPD-Pot-0446
POPTR_0004s11500
B9H0G4
POPTR_0004s11500g
27
iEKPD-Pot-0455
POPTR_0004s14540
B9N5B0
POPTR_0004s14540g
28
iEKPD-Pot-0459
POPTR_0004s15270
B9N4U7
POPTR_0004s15270g
29
iEKPD-Pot-0494
POPTR_0004s22770
U5GNA4
POPTR_0004s22770g
30
iEKPD-Pot-0495
POPTR_0004s22790
U5GKP5
POPTR_0004s22790g
31
iEKPD-Pot-0541
POPTR_0005s07370
B9H4R2
POPTR_0005s07370g
32
iEKPD-Pot-0585
POPTR_0005s17290
B9H709
POPTR_0005s17290g
33
iEKPD-Pot-0623
POPTR_0005s27290
B9H5H9
POPTR_0005s27290g
34
iEKPD-Pot-0641
POPTR_0006s06160
B9N707
POPTR_0006s06160g
35
iEKPD-Pot-0644
POPTR_0006s06760
B9HAJ5
POPTR_0006s06760g
36
iEKPD-Pot-0670
POPTR_0006s11020
B9HDK0
POPTR_0006s11020g
37
iEKPD-Pot-0697
POPTR_0006s18710
U5GDZ1
POPTR_0006s18710g
38
iEKPD-Pot-0704
POPTR_0006s20030
B9HAS6
POPTR_0006s20030g
39
iEKPD-Pot-0733
POPTR_0006s27940
B9HAW5
POPTR_0006s27940g
40
iEKPD-Pot-0765
POPTR_0007s03570
A9PFI3
POPTR_0007s03570g
41
iEKPD-Pot-0771
POPTR_0007s05080
B9HFD8
POPTR_0007s05080g
42
iEKPD-Pot-0853
POPTR_0008s11560
B9HIY8
POPTR_0008s11560g
43
iEKPD-Pot-0928
POPTR_0009s11010
B9HRW1
POPTR_0009s11010g
44
iEKPD-Pot-0956
POPTR_0010s00490
B9HXA7
POPTR_0010s00490g
45
iEKPD-Pot-0990
POPTR_0010s08220
U5G1P1
POPTR_0010s08220g
46
iEKPD-Pot-1270
POPTR_0013s04320
B9I5N1
POPTR_0013s04320g
47
iEKPD-Pot-1286
POPTR_0013s09420
B9I8E5
POPTR_0013s09420g
48
iEKPD-Pot-1292
POPTR_0013s11480
B9NF78
POPTR_0013s11480g
49
iEKPD-Pot-1887
POPTR_1178s00200
U5FTP1
POPTR_0014s15965g
50
iEKPD-Pot-1490
POPTR_0016s14540
B9IGV2
POPTR_0016s14540g
51
iEKPD-Pot-1548
POPTR_0017s06040
U5FHQ1
POPTR_0017s06040g
52
iEKPD-Pot-1552
POPTR_0017s07570
B9IJB5
POPTR_0017s07570g
53
iEKPD-Pot-1580
POPTR_0017s12380
U5FLP8
POPTR_0017s12380g
54
iEKPD-Pot-1600
POPTR_0018s02460
B9IL49
POPTR_0018s02460g
55
iEKPD-Pot-1635
POPTR_0018s10450
B9IM29
POPTR_0018s10450g
56
iEKPD-Pot-1671
POPTR_0019s00790
B9IP41
POPTR_0019s00790g
57
iEKPD-Pot-1688
POPTR_0019s03480
B9IP98
POPTR_0019s03480g
58
iEKPD-Pot-1695
POPTR_0019s07530
B9IPI5
POPTR_0019s07530g
59
iEKPD-Pot-1737
POPTR_0019s14810
B9INP1
POPTR_0019s14810g
60
iEKPD-Pot-1755
POPTR_0025s00500
U7E192
POPTR_0025s00500g