Prunus persica      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 32 genes.  Reviewed (0 or Unreviewed (32

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Prp-0009
PRUPE_1G026400
A0A251QRS1
PRUPE_1G026400
2
iEKPD-Prp-0014
PRUPE_1G038800
M5XWX9
PRUPE_1G038800
3
iEKPD-Prp-0036
PRUPE_1G091700
M5XRF5
PRUPE_1G091700
4
iEKPD-Prp-0040
PRUPE_1G105000
M5XYK3
PRUPE_1G105000
5
iEKPD-Prp-0130
PRUPE_1G392900
M5XF03
PRUPE_1G392900
6
iEKPD-Prp-0197
PRUPE_1G521600
M5XCP3
PRUPE_1G521600
7
iEKPD-Prp-0198
PRUPE_1G521800
A0A251RGK9
PRUPE_1G521800
8
iEKPD-Prp-0199
PRUPE_1G526200
M5XD32
PRUPE_1G526200
9
iEKPD-Prp-0202
PRUPE_1G539600
A0A251RHK6
PRUPE_1G539600
10
iEKPD-Prp-0213
PRUPE_1G573300
M5XWC3
PRUPE_1G573300
11
iEKPD-Prp-0290
PRUPE_2G195900
M5XCG4
PRUPE_2G195900
12
iEKPD-Prp-0321
PRUPE_2G261600
M5WZX2
PRUPE_2G261600
13
iEKPD-Prp-0394
PRUPE_3G097900
A0A251PY02
PRUPE_3G097900
14
iEKPD-Prp-0510
PRUPE_3G262900
A0A251Q5P7
PRUPE_3G262900
15
iEKPD-Prp-0571
PRUPE_4G062900
M5X0N5
PRUPE_4G062900
16
iEKPD-Prp-0572
PRUPE_4G063100
M5WHD0
PRUPE_4G063100
17
iEKPD-Prp-0594
PRUPE_4G085000
M5X7P2
PRUPE_4G085000
18
iEKPD-Prp-0734
PRUPE_5G054500
A0A251P474
PRUPE_5G054500
19
iEKPD-Prp-0821
PRUPE_6G043300
M5WHU3
PRUPE_6G043300
20
iEKPD-Prp-0822
PRUPE_6G043700
M5W5N0
PRUPE_6G043700
21
iEKPD-Prp-0846
PRUPE_6G100200
A0A251NMV0
PRUPE_6G100200
22
iEKPD-Prp-0861
PRUPE_6G141700
M5WN03
PRUPE_6G141700
23
iEKPD-Prp-0873
PRUPE_6G156900
M5WPB6
PRUPE_6G156900
24
iEKPD-Prp-0901
PRUPE_6G192200
M5WBQ2
PRUPE_6G192200
25
iEKPD-Prp-0953
PRUPE_6G290400
M5WAN4
PRUPE_6G290400
26
iEKPD-Prp-0954
PRUPE_6G290700
M5WAX9
PRUPE_6G290700
27
iEKPD-Prp-0962
PRUPE_6G295600
A0A251NYZ1
PRUPE_6G295600
28
iEKPD-Prp-0989
PRUPE_6G349100
M5VZL1
PRUPE_6G349100
29
iEKPD-Prp-1032
PRUPE_7G138200
M5W917
PRUPE_7G138200
30
iEKPD-Prp-1081
PRUPE_7G244500
M5W1Z0
PRUPE_7G244500
31
iEKPD-Prp-1089
PRUPE_7G261300
M5WA19
PRUPE_7G261300
32
iEKPD-Prp-1122
PRUPE_8G115900
A0A251MWI0
PRUPE_8G115900