Setaria italica      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 54 genes.  Reviewed (0 or Unreviewed (54

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Sei-0873
Si026369m.g
K3ZIG7
CIPK1
2
iEKPD-Sei-0373
Si010116m.g
K3Y7C5
CIPK2
3
iEKPD-Sei-1281
Si036283m.g
K4ABM6
LOC101752819
4
iEKPD-Sei-0869
Si026322m.g
K3ZIC0
LOC101753202
5
iEKPD-Sei-1065
Si029846m.g
K3ZTB6
LOC101754539
6
iEKPD-Sei-0763
Si022358m.g
K3Z738
LOC101756577
7
iEKPD-Sei-0092
Si000965m.g
K3XGE5
LOC101757197
8
iEKPD-Sei-0256
Si006409m.g
K3XWV1
LOC101757697
9
iEKPD-Sei-0584
Si017133m.g
K3YS89
LOC101757993
10
iEKPD-Sei-1063
Si029827m.g
K3ZT97
LOC101758021
11
iEKPD-Sei-1286
Si036309m.g
K4ABQ2
LOC101758084
12
iEKPD-Sei-0094
Si001041m.g
K3XGM0
LOC101758543
13
iEKPD-Sei-1254
Si035675m.g
K4A9W9
LOC101762701
14
iEKPD-Sei-0372
Si010093m.g
K3Y7A2
LOC101763048
15
iEKPD-Sei-1290
Si036531m.g
K4ACC4
LOC101763654
16
iEKPD-Sei-0132
Si001965m.g
K3XJ92
LOC101764618
17
iEKPD-Sei-0768
Si022448m.g
K3Z7C8
LOC101765115
18
iEKPD-Sei-1253
Si035646m.g
K4A9U0
LOC101765549
19
iEKPD-Sei-0745
Si021946m.g
K3Z5X8
LOC101767148
20
iEKPD-Sei-1261
Si035799m.g
K4AA92
LOC101768376
21
iEKPD-Sei-0106
Si001288m.g
K3XHB7
LOC101768415
22
iEKPD-Sei-0374
Si010128m.g
K3Y7D7
LOC101769028
23
iEKPD-Sei-1064
Si029831m.g
K3ZTA1
LOC101769428
24
iEKPD-Sei-0752
Si022090m.g
K3Z6C1
LOC101769723
25
iEKPD-Sei-1241
Si035270m.g
K4A8R4
LOC101769880
26
iEKPD-Sei-0723
Si021606m.g
K3Z4Y8
LOC101770809
27
iEKPD-Sei-0376
Si010180m.g
K3Y7I9
LOC101771684
28
iEKPD-Sei-0764
Si022378m.g
K3Z758
LOC101772001
29
iEKPD-Sei-1271
Si036041m.g
K4AAY4
LOC101775125
30
iEKPD-Sei-0200
Si005356m.g
K3XTU9
LOC101776111
31
iEKPD-Sei-0616
Si018012m.g
K3YUR6
LOC101778169
32
iEKPD-Sei-0614
Si017915m.g
K3YUG9
LOC101779241
33
iEKPD-Sei-0250
Si006337m.g
K3XWM9
LOC101779470
34
iEKPD-Sei-1070
Si029903m.g
K3ZTH3
LOC101781023
35
iEKPD-Sei-1061
Si029821m.g
K3ZT91
LOC101781426
36
iEKPD-Sei-0111
Si001346m.g
K3XHH5
LOC101781756
37
iEKPD-Sei-1081
Si030417m.g
K3ZUY6
LOC101782227
38
iEKPD-Sei-0115
Si001423m.g
K3XHQ1
LOC101782586
39
iEKPD-Sei-0464
Si013759m.g
K3YHP1
LOC101783685
40
iEKPD-Sei-0462
Si013722m.g
K3YHK4
LOC101784626
41
iEKPD-Sei-0751
Si022074m.g
K3Z6A5
LOC101784956
42
iEKPD-Sei-0740
Si021825m.g
K3Z5L0
LOC101785071
43
iEKPD-Sei-1057
Si029714m.g
K3ZSY4
LOC101786516
44
iEKPD-Sei-0601
Si017369m.g
K3YSX4
LOC101786757
45
iEKPD-Sei-0750
Si021995m.g
K3Z627
LOC101786950
46
iEKPD-Sei-1340
Si040049m.g
K4AMB1
LOC101786974
47
iEKPD-Sei-0098
Si001185m.g
K3XH14
SETIT_001185mg
48
iEKPD-Sei-0114
Si001420m.g
K3XHP8
SETIT_001420mg
49
iEKPD-Sei-0642
Si019716m.g
K3YZK6
SETIT_019716mg
50
iEKPD-Sei-0759
Si022225m.g
K3Z6Q6
SETIT_022225mg
51
iEKPD-Sei-0776
Si024166m.g
K3ZC92
SETIT_024166mg
52
iEKPD-Sei-0875
Si026385m.g
K3ZII3
SETIT_026385mg
53
iEKPD-Sei-0883
Si026521m.g
K3ZIW8
SETIT_026521mg
54
iEKPD-Sei-1350
Si040877m.g
K4APM9
SETIT_040877mg