Solanum lycopersicum      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 55 genes.  Reviewed (0 or Unreviewed (55

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Sol-0049
Solyc01g081290.2
K4AY21
2
iEKPD-Sol-0092
Solyc01g105670.2
K4B2D7
3
iEKPD-Sol-0209
Solyc02g080090.1
K4B9N0
4
iEKPD-Sol-0471
Solyc04g074500.2
K4BTY8
5
iEKPD-Sol-0550
Solyc05g041110.1
K4C092
6
iEKPD-Sol-0592
Solyc06g008830.1
K4C3R3
7
iEKPD-Sol-0607
Solyc06g050290.1
K4C5H4
8
iEKPD-Sol-0632
Solyc06g068450.1
K4C820
9
iEKPD-Sol-0657
Solyc06g082440.1
K4CAA3
10
iEKPD-Sol-0754
Solyc07g063760.1
K4CH59
11
iEKPD-Sol-0880
Solyc09g042660.2
K4CSW9
12
iEKPD-Sol-0908
Solyc09g083090.2
K4CVT5
13
iEKPD-Sol-0967
Solyc10g061860.1
K4D1H6
14
iEKPD-Sol-1005
Solyc10g085450.1
K4D3X9
15
iEKPD-Sol-1019
Solyc11g010130.1
K4D5H4
16
iEKPD-Sol-1020
Solyc11g010150.1
K4D5H6
17
iEKPD-Sol-1038
Solyc11g039810.1
K4D7V7
18
iEKPD-Sol-1057
Solyc11g069310.1
K4DA87
19
iEKPD-Sol-1102
Solyc12g016020.1
K4DD36
20
iEKPD-Sol-1104
Solyc12g016040.1
K4DD38
21
iEKPD-Sol-1094
Solyc12g010130.1
K4DCA0
101055500
22
iEKPD-Sol-0566
Solyc05g053210.2
K4C201
101243894
23
iEKPD-Sol-0588
Solyc06g007430.1
K4C3C5
101247430
24
iEKPD-Sol-0589
Solyc06g007440.2
K4C3C6
101247723
25
iEKPD-Sol-0177
Solyc02g072530.1
K4B8M7
101248263
26
iEKPD-Sol-0087
Solyc01g103940.2
K4B1W9
101248921
27
iEKPD-Sol-0414
Solyc04g009910.2
K4BPE6
101249257
28
iEKPD-Sol-1153
Solyc12g098910.1
K4DHR4
101249805
29
iEKPD-Sol-0279
Solyc03g006110.2
K4BE34
101250367
30
iEKPD-Sol-0823
Solyc08g077780.2
K4CND7
101250433
31
iEKPD-Sol-0251
Solyc02g090390.2
K4BCI8
101251432
32
iEKPD-Sol-0178
Solyc02g072540.2
K4B8M8
101251538
33
iEKPD-Sol-0877
Solyc09g018280.1
K4CS94
101254823
34
iEKPD-Sol-0605
Solyc06g050270.1
K4C5H2
101255701
35
iEKPD-Sol-0606
Solyc06g050280.1
K4C5H3
101256293
36
iEKPD-Sol-0019
Solyc01g008850.2
K4AT81
101257694
37
iEKPD-Sol-1049
Solyc11g062410.1
K4D952
101258032
38
iEKPD-Sol-0272
Solyc03g005330.1
K4BDV7
101258333
39
iEKPD-Sol-1008
Solyc10g085680.1
K4D402
101259692
40
iEKPD-Sol-0608
Solyc06g050300.1
K4C5H5
101259941
41
iEKPD-Sol-0119
Solyc02g021440.2
K4B4Z4
101259992
42
iEKPD-Sol-0553
Solyc05g047600.2
K4C0Z3
101261122
43
iEKPD-Sol-0668
Solyc07g005440.1
K4CB16
101264440
44
iEKPD-Sol-0909
Solyc09g083100.1
K4CVT6
101264555
45
iEKPD-Sol-0575
Solyc05g056550.2
K4C2X9
101265336
46
iEKPD-Sol-0474
Solyc04g076810.2
K4BUB9
101265432
47
iEKPD-Sol-0799
Solyc08g067310.1
K4CLV7
101268207
48
iEKPD-Sol-0099
Solyc01g108280.2
K4B344
101268620
49
iEKPD-Sol-0368
Solyc03g115700.2
Q6XNM3
543870
50
iEKPD-Sol-1093
Solyc12g009570.1
Q4W3B3
cipk
51
iEKPD-Sol-0419
Solyc04g012160.2
A1IKU3
LeSRK2C
52
iEKPD-Sol-0413
Solyc04g009900.2
Q9SDX9
PPCK1
53
iEKPD-Sol-0615
Solyc06g053620.2
Q84JP7
PPCK2
54
iEKPD-Sol-0562
Solyc05g052270.1
G3XKW8
SlCIPK2
55
iEKPD-Sol-0146
Solyc02g067030.2
Q9M726
SNF1