Solanum tuberosum      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 51 genes.  Reviewed (0 or Unreviewed (51

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Sot-0050
PGSC0003DMG400001783
M0ZNI3
2
iEKPD-Sot-0166
PGSC0003DMG400006083
M1A686
3
iEKPD-Sot-0216
PGSC0003DMG400008108
M1AEB8
4
iEKPD-Sot-0322
PGSC0003DMG400011480
M1ATH9
5
iEKPD-Sot-0323
PGSC0003DMG400011502
M1ATL1
6
iEKPD-Sot-0381
PGSC0003DMG400013392
M1B1C9
7
iEKPD-Sot-0392
PGSC0003DMG400013679
M1B2H4
8
iEKPD-Sot-0436
PGSC0003DMG400015079
M1B7N5
9
iEKPD-Sot-0462
PGSC0003DMG400015977
M1BB63
10
iEKPD-Sot-0467
PGSC0003DMG400016156
M1BBR8
11
iEKPD-Sot-0516
PGSC0003DMG400017763
M1BI90
12
iEKPD-Sot-0526
PGSC0003DMG400018026
M1BJ39
13
iEKPD-Sot-0610
PGSC0003DMG400020550
M1BU67
14
iEKPD-Sot-0689
PGSC0003DMG400023404
M1C5B9
15
iEKPD-Sot-0692
PGSC0003DMG400023441
M1C5H7
16
iEKPD-Sot-0703
PGSC0003DMG400023636
M1C6E4
17
iEKPD-Sot-0788
PGSC0003DMG400026211
M1CH82
18
iEKPD-Sot-0801
PGSC0003DMG400026743
M1CJG5
19
iEKPD-Sot-0815
PGSC0003DMG400027149
M1CL76
20
iEKPD-Sot-0872
PGSC0003DMG400028479
M1CRR5
21
iEKPD-Sot-0889
PGSC0003DMG400029077
M1CU56
22
iEKPD-Sot-0953
PGSC0003DMG400030830
M1D1F6
23
iEKPD-Sot-1013
PGSC0003DMG400040053
M1DKH3
24
iEKPD-Sot-1135
PGSC0003DMG402014044
M1B3P0
25
iEKPD-Sot-g023
PGSC0003DMG402029166
M1CUG6
26
iEKPD-Sot-0672
PGSC0003DMG400022711
M1C2Q7
102578501
27
iEKPD-Sot-0611
PGSC0003DMG400020564
M1BU92
102579507
28
iEKPD-Sot-0873
PGSC0003DMG400028491
M1CRT5
102580534
29
iEKPD-Sot-0413
PGSC0003DMG400013989
M1B3J2
102580991
30
iEKPD-Sot-0325
PGSC0003DMG400011641
M1AU66
102582953
31
iEKPD-Sot-0573
PGSC0003DMG400019375
M1BPG2
102585664
32
iEKPD-Sot-0487
PGSC0003DMG400017173
M1BFU1
102589245
33
iEKPD-Sot-0224
PGSC0003DMG400008404
M1AFI4
102590921
34
iEKPD-Sot-0316
PGSC0003DMG400011175
M1AS53
102591863
35
iEKPD-Sot-0124
PGSC0003DMG400004601
M1A014
102593681
36
iEKPD-Sot-0212
PGSC0003DMG400007899
M1ADH3
102593683
37
iEKPD-Sot-0975
PGSC0003DMG400032508
M1D5U2
102594472
38
iEKPD-Sot-0469
PGSC0003DMG400016291
M1BCC3
102594673
39
iEKPD-Sot-1107
PGSC0003DMG401033568
M1D722
102596116
40
iEKPD-Sot-0071
PGSC0003DMG400002884
M0ZT21
102597938
41
iEKPD-Sot-0202
PGSC0003DMG400007389
M1ABK4
102598235
42
iEKPD-Sot-0173
PGSC0003DMG400006384
M1A7H9
102598473
43
iEKPD-Sot-0652
PGSC0003DMG400022019
M1BZP7
102598999
44
iEKPD-Sot-0774
PGSC0003DMG400025895
M1CFW5
102599363
45
iEKPD-Sot-0314
PGSC0003DMG400011106
M1ART4
102600074
46
iEKPD-Sot-0934
PGSC0003DMG400030462
M1CZR9
102601836
47
iEKPD-Sot-0888
PGSC0003DMG400029075
M1CU55
102604679
48
iEKPD-Sot-0963
PGSC0003DMG400031335
M1D3K2
102604911
49
iEKPD-Sot-0865
PGSC0003DMG400028440
M1CRK5
102605225
50
iEKPD-Sot-0731
PGSC0003DMG400024561
M1CA53
102606284
51
iEKPD-Sot-0712
PGSC0003DMG400023803
J9ULI1
SnRK2.4