Sorghum bicolor      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 54 genes.  Reviewed (0 or Unreviewed (54

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Sob-0991
SORBI_3008G032000
C4P7T9
CIPK02
2
iEKPD-Sob-0706
SORBI_3005G024200
C4P7T6
CIPK03
3
iEKPD-Sob-0068
SORBI_3001G161200
C4P7R8
CIPK04
4
iEKPD-Sob-1034
SORBI_3008G158100
C4P7U0
CIPK07
5
iEKPD-Sob-0180
SORBI_3001G523200
C4P7S1
CIPK09
6
iEKPD-Sob-1103
SORBI_3009G097300
C4P7U3
CIPK11
7
iEKPD-Sob-0517
SORBI_3003G302800
C4P7T3
CIPK12
8
iEKPD-Sob-1139
SORBI_3009G195800
C4P7U5
CIPK13
9
iEKPD-Sob-0275
SORBI_3002G203100
C4P7S4
CIPK14
10
iEKPD-Sob-0274
SORBI_3002G203000
C4P7S3
CIPK16
11
iEKPD-Sob-0354
SORBI_3002G390100
C4P7S5
CIPK17
12
iEKPD-Sob-0129
SORBI_3001G379600
C4P7R9
CIPK19
13
iEKPD-Sob-0379
SORBI_3003G024400
C4P7S9
CIPK20
14
iEKPD-Sob-0440
SORBI_3003G139500
C4P7T1
CIPK21
15
iEKPD-Sob-0940
SORBI_3007G140900
C4P7T7
CIPK22
16
iEKPD-Sob-1237
SORBI_3010G186300
C4P7U7
CIPK24
17
iEKPD-Sob-0362
SORBI_3002G417300
C4P7S7
CIPK25
18
iEKPD-Sob-0136
SORBI_3001G390200
C4P7S0
CIPK27
19
iEKPD-Sob-0701
SORBI_3005G012000
C4P7T5
CIPK30
20
iEKPD-Sob-0588
SORBI_3004G049500
C4P7T4
CIPK31
21
iEKPD-Sob-1223
SORBI_3010G161000
C4P7U6
CIPK32
22
iEKPD-Sob-0645
SORBI_3004G219900
Q94EN6
PPCK
23
iEKPD-Sob-1118
SORBI_3009G149900
C5YYN2
SAPK4
24
iEKPD-Sob-0030
SORBI_3001G078800
C5WZA8
SORBI_3001G078800
25
iEKPD-Sob-0051
SORBI_3001G117900
A0A1B6QIJ9
SORBI_3001G117900
26
iEKPD-Sob-0069
SORBI_3001G168400
C5WT44
SORBI_3001G168400
27
iEKPD-Sob-0102
SORBI_3001G294400
A0A1B6QLV2
SORBI_3001G294400
28
iEKPD-Sob-0120
SORBI_3001G350700
C5WXQ1
SORBI_3001G350700
29
iEKPD-Sob-0141
SORBI_3001G408200
A0A1B6QNX7
SORBI_3001G408200
30
iEKPD-Sob-0211
SORBI_3002G034700
A0A1W0W220
SORBI_3002G034700
31
iEKPD-Sob-0282
SORBI_3002G231300
A0A1W0W5L3
SORBI_3002G231300
32
iEKPD-Sob-0290
SORBI_3002G262850
A0A1W0W5T2
SORBI_3002G262850
33
iEKPD-Sob-0351
SORBI_3002G379400
C5X2H4
SORBI_3002G379400
34
iEKPD-Sob-0365
SORBI_3002G424500
A0A1B6QGE9
SORBI_3002G424500
35
iEKPD-Sob-0380
SORBI_3003G024600
C5XL57
SORBI_3003G024600
36
iEKPD-Sob-0453
SORBI_3003G181800
A0A1B6Q433
SORBI_3003G181800
37
iEKPD-Sob-0508
SORBI_3003G284000
C5XJ05
SORBI_3003G284000
38
iEKPD-Sob-0516
SORBI_3003G302600
A0A1W0VZP2
SORBI_3003G302600
39
iEKPD-Sob-0534
SORBI_3003G339700
A0A1B6Q6U3
SORBI_3003G339700
40
iEKPD-Sob-0541
SORBI_3003G370100
A0A1B6Q781
SORBI_3003G370100
41
iEKPD-Sob-0625
SORBI_3004G173500
C5XU64
SORBI_3004G173500
42
iEKPD-Sob-0683
SORBI_3004G338000
C5XV67
SORBI_3004G338000
43
iEKPD-Sob-0819
SORBI_3006G083000
A0A1B6PKZ0
SORBI_3006G083000
44
iEKPD-Sob-0902
SORBI_3006G279100
C5YB38
SORBI_3006G279100
45
iEKPD-Sob-0986
SORBI_3008G016200
C5YQL7
SORBI_3008G016200
46
iEKPD-Sob-1030
SORBI_3008G147000
C5YQV1
SORBI_3008G147000
47
iEKPD-Sob-1064
SORBI_3009G018450
A0A1Z5R166
SORBI_3009G018450
48
iEKPD-Sob-1078
SORBI_3009G034200
A0A1Z5R1F1
SORBI_3009G034200
49
iEKPD-Sob-1101
SORBI_3009G096433
A0A1Z5R1U9
SORBI_3009G096433
50
iEKPD-Sob-1102
SORBI_3009G096700
A0A1Z5R2J4
SORBI_3009G096700
51
iEKPD-Sob-1125
SORBI_3009G173100
C5YZP8
SORBI_3009G173100
52
iEKPD-Sob-1129
SORBI_3009G174700
A0A1Z5R386
SORBI_3009G174700
53
iEKPD-Sob-1147
SORBI_3009G208100
C5Z1H4
SORBI_3009G208100
54
iEKPD-Sob-1204
SORBI_3010G114800
A0A1W0VSF8
SORBI_3010G114800