Theobroma cacao      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 33 genes.  Reviewed (0 or Unreviewed (33

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Thc-0017
TCM_000556
A0A061DHP5
TCM_000556
2
iEKPD-Thc-0042
TCM_001052
A0A061DHQ0
TCM_001052
3
iEKPD-Thc-0084
TCM_003188
A0A061DVQ0
TCM_003188
4
iEKPD-Thc-0106
TCM_005054
A0A061E018
TCM_005054
5
iEKPD-Thc-0163
TCM_006935
A0A061E0D4
TCM_006935
6
iEKPD-Thc-0165
TCM_006995
A0A061DZR8
TCM_006995
7
iEKPD-Thc-0177
TCM_007405
A0A061E8Z0
TCM_007405
8
iEKPD-Thc-0322
TCM_015836
A0A061G461
TCM_015836
9
iEKPD-Thc-0373
TCM_018660
A0A061EF40
TCM_018660
10
iEKPD-Thc-0407
TCM_019680
A0A061EHS0
TCM_019680
11
iEKPD-Thc-0413
TCM_019732
A0A061EHJ6
TCM_019732
12
iEKPD-Thc-0414
TCM_019737
A0A061EHZ9
TCM_019737
13
iEKPD-Thc-0415
TCM_019794
A0A061EI64
TCM_019794
14
iEKPD-Thc-0443
TCM_020759
A0A061EMH8
TCM_020759
15
iEKPD-Thc-0463
TCM_021498
A0A061EPE3
TCM_021498
16
iEKPD-Thc-0538
TCM_026198
A0A061F8U5
TCM_026198
17
iEKPD-Thc-0577
TCM_027428
A0A061G9D6
TCM_027428
18
iEKPD-Thc-0617
TCM_029422
A0A061GDZ5
TCM_029422
19
iEKPD-Thc-0634
TCM_029677
A0A061GLJ6
TCM_029677
20
iEKPD-Thc-0635
TCM_029678
A0A061GEG9
TCM_029678
21
iEKPD-Thc-0847
TCM_034456
A0A061FEN0
TCM_034456
22
iEKPD-Thc-0850
TCM_034561
A0A061FEQ0
TCM_034561
23
iEKPD-Thc-0859
TCM_034866
A0A061FF36
TCM_034866
24
iEKPD-Thc-0905
TCM_036914
A0A061GJK6
TCM_036914
25
iEKPD-Thc-0913
TCM_037071
A0A061GJH5
TCM_037071
26
iEKPD-Thc-0955
TCM_038096
A0A061GNU8
TCM_038096
27
iEKPD-Thc-0966
TCM_038870
A0A061GRH4
TCM_038870
28
iEKPD-Thc-0990
TCM_041026
A0A061GZG9
TCM_041026
29
iEKPD-Thc-0993
TCM_041043
A0A061GT50
TCM_041043
30
iEKPD-Thc-1024
TCM_042264
A0A061GYU2
TCM_042264
31
iEKPD-Thc-1025
TCM_042270
A0A061GYZ0
TCM_042270
32
iEKPD-Thc-1089
TCM_045396
A0A061FTA1
TCM_045396
33
iEKPD-Thc-1090
TCM_045446
A0A061FRU6
TCM_045446