Trichoderma virens      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 22 genes.  Reviewed (0 or Unreviewed (22

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Trv-0002
TRIVIDRAFT_112776
G9MLB2
TRIVIDRAFT_112776
2
iEKPD-Trv-0008
TRIVIDRAFT_123423
G9N0J4
TRIVIDRAFT_123423
3
iEKPD-Trv-0015
TRIVIDRAFT_144790
G9MKC6
TRIVIDRAFT_144790
4
iEKPD-Trv-0018
TRIVIDRAFT_146683
G9MLV5
TRIVIDRAFT_146683
5
iEKPD-Trv-0051
TRIVIDRAFT_202590
G9MXT7
TRIVIDRAFT_202590
6
iEKPD-Trv-0067
TRIVIDRAFT_221402
G9MN71
TRIVIDRAFT_221402
7
iEKPD-Trv-0068
TRIVIDRAFT_224528
G9N0H6
TRIVIDRAFT_224528
8
iEKPD-Trv-0069
TRIVIDRAFT_226358
G9N6P9
TRIVIDRAFT_226358
9
iEKPD-Trv-0070
TRIVIDRAFT_227551
G9N9T1
TRIVIDRAFT_227551
10
iEKPD-Trv-0082
TRIVIDRAFT_30406
G9MMS6
TRIVIDRAFT_30406
11
iEKPD-Trv-0384
TRIVIDRAFT_3907
G9N3A2
TRIVIDRAFT_3907
12
iEKPD-Trv-0093
TRIVIDRAFT_39175
G9NB22
TRIVIDRAFT_39175
13
iEKPD-Trv-0095
TRIVIDRAFT_40990
G9N999
TRIVIDRAFT_40990
14
iEKPD-Trv-0102
TRIVIDRAFT_45054
G9N5X1
TRIVIDRAFT_45054
15
iEKPD-Trv-0109
TRIVIDRAFT_49572
G9N2H9
TRIVIDRAFT_49572
16
iEKPD-Trv-0120
TRIVIDRAFT_58043
G9MPZ2
TRIVIDRAFT_58043
17
iEKPD-Trv-0121
TRIVIDRAFT_58544
G9MZJ6
TRIVIDRAFT_58544
18
iEKPD-Trv-0124
TRIVIDRAFT_60956
G9MSF3
TRIVIDRAFT_60956
19
iEKPD-Trv-0132
TRIVIDRAFT_67189
G9N5C4
TRIVIDRAFT_67189
20
iEKPD-Trv-0136
TRIVIDRAFT_68804
G9MZ83
TRIVIDRAFT_68804
21
iEKPD-Trv-0138
TRIVIDRAFT_69167
G9N249
TRIVIDRAFT_69167
22
iEKPD-Trv-0143
TRIVIDRAFT_72946
G9MEU7
TRIVIDRAFT_72946