Vitis vinifera      CAMK/CAMKL


※ CAMKL family introduction

    CAMKL family consists of several subfamily including SNRK, QIK, BRSK, AMPK, MARK, NuaK, NIM1, HUNK, LKB, PASK, MELK and CHK1. They are classified into CAMKL family for the high similarity kinase catalytic domain. AMPK subfamily (AMP-activated protein kinase) consists of three subunits, a catalytic subunit (α) and two regulatory subunits (β and γ). Two catalytic subunits have been identified in mammals. Activation of AMPK is involved in two steps; first, AMP binds to γ-subunit, and second the phosphorylation of threonine 172 by LKB1. Activated AMPK targets a variety of substrates and participates different cellular processes including mTORC1 signaling, phosphorylation of p53 or other tumor suppressors (1). MARK subfamily (microtubule-affinity regulating kinases) consists of four members (MARK1-MARK4) in mammals cells. All isoforms contain a N-terminal header, a catalytic kinase domain, a ubiquitin-associated domain, a spacer domain and a C-terminal KA1 domain. MARKs are discovered for its ability to regulate the stability of microtubules. Studies also show that MARK has some relation with disease, such as Alzheimer's disease (2). Nuak subfamilies are AMPK related kinases. NuaK1 are stress-activated kinase which is involved in tolerance to glucose starvation. NuaK1 can induce cell-cell detachment by increasing F-actin conversion to G-actin. NuaK1 can protect cells from CD95-mediated apoptosis and is required for the increased motility and invasiveness of CD95- activated tumor cells (3).

Reference
1. Luo, Z., Zang, M. and Guo, W. (2010) AMPK as a metabolic tumor suppressor: control of metabolism and cell growth. Future Oncol, 6, 457-470. PMID: 20222801
2. Matenia, D. and Mandelkow, E.M. (2009) The tau of MARK: a polarized view of the cytoskeleton. Trends Biochem Sci, 34, 332-342. PMID: 19559622
3. Suzuki, A., Kusakai, G., Kishimoto, A., Minegichi, Y., Ogura, T. and Esumi, H. (2003) Induction of cell-cell detachment during glucose starvation through F-actin conversion by SNARK, the fourth member of the AMP-activated protein kinase catalytic subunit family. Biochem Biophys Res Commun, 311, 156-161. PMID: 14575707


There are 37 genes.  Reviewed (0 or Unreviewed (37

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Viv-0449
VIT_06s0009g01840
C4P7W7
CIPK018
2
iEKPD-Viv-0714
VIT_11s0016g00200
A5C5K7
CIPK03
3
iEKPD-Viv-0585
VIT_08s0058g01040
A5BJJ8
CIPK07
4
iEKPD-Viv-0438
VIT_06s0004g07870
C4P7V9
CIPK10
5
iEKPD-Viv-0992
VIT_15s0048g02740
C4P7W1
CIPK12
6
iEKPD-Viv-0878
VIT_13s0067g02480
C4P7W2
CIPK13
7
iEKPD-Viv-0754
VIT_11s0052g01700
C4P7W3
CIPK14
8
iEKPD-Viv-0373
VIT_05s0020g04570
C4P7W9
CIPK20
9
iEKPD-Viv-0106
VIT_00s0710g00020
D7U6Z6
VIT_00s0710g00020
10
iEKPD-Viv-0229
VIT_02s0236g00130
D7SYT7
VIT_02s0236g00130
11
iEKPD-Viv-0251
VIT_03s0063g01080
D7TPP4
VIT_03s0063g01080
12
iEKPD-Viv-0317
VIT_04s0008g05770
F6H3I7
VIT_04s0008g05770
13
iEKPD-Viv-0356
VIT_05s0020g00830
D7T694
VIT_05s0020g00830
14
iEKPD-Viv-0379
VIT_05s0049g00950
D7SZG1
VIT_05s0049g00950
15
iEKPD-Viv-0408
VIT_06s0004g01140
D7SLE3
VIT_06s0004g01140
16
iEKPD-Viv-0419
VIT_06s0004g02990
F6GTZ9
VIT_06s0004g02990
17
iEKPD-Viv-0437
VIT_06s0004g07830
F6GUC6
VIT_06s0004g07830
18
iEKPD-Viv-0490
VIT_07s0031g03210
D7SWL8
VIT_07s0031g03210
19
iEKPD-Viv-0520
VIT_07s0191g00070
D7TRL4
VIT_07s0191g00070
20
iEKPD-Viv-0521
VIT_07s0197g00080
F6H7R3
VIT_07s0197g00080
21
iEKPD-Viv-0566
VIT_08s0040g00720
F6HQQ4
VIT_08s0040g00720
22
iEKPD-Viv-0586
VIT_08s0058g01090
F6GXY0
VIT_08s0058g01090
23
iEKPD-Viv-0592
VIT_08s0058g01450
D7SQX7
VIT_08s0058g01450
24
iEKPD-Viv-0644
VIT_09s0070g00140
F6I3C0
VIT_09s0070g00140
25
iEKPD-Viv-0645
VIT_09s0070g00160
F6I3C1
VIT_09s0070g00160
26
iEKPD-Viv-0651
VIT_10s0003g01410
F6HMA4
VIT_10s0003g01410
27
iEKPD-Viv-0652
VIT_10s0003g01420
F6HMA5
VIT_10s0003g01420
28
iEKPD-Viv-0667
VIT_10s0003g04020
D7TKB8
VIT_10s0003g04020
29
iEKPD-Viv-0735
VIT_11s0016g05420
D7TC25
VIT_11s0016g05420
30
iEKPD-Viv-0810
VIT_12s0035g00310
F6HK75
VIT_12s0035g00310
31
iEKPD-Viv-0919
VIT_14s0036g00420
F6H624
VIT_14s0036g00420
32
iEKPD-Viv-0959
VIT_14s0108g01230
D7SXG2
VIT_14s0108g01230
33
iEKPD-Viv-1011
VIT_16s0022g00350
F6HAV6
VIT_16s0022g00350
34
iEKPD-Viv-1162
VIT_18s0001g00980
F6H0E2
VIT_18s0001g00980
35
iEKPD-Viv-1178
VIT_18s0001g06310
E0CRN9
VIT_18s0001g06310
36
iEKPD-Viv-1180
VIT_18s0001g07070
F6H102
VIT_18s0001g07070
37
iEKPD-Viv-1183
VIT_18s0001g07980
F6GZK6
VIT_18s0001g07980