Populus trichocarpa      Other/SCY


※ SCY family introduction

    SCY1 family is composed of three members in human genome (1). SCYL1 is involved in regulating COPI-mediated retrograde traffic. Isoform 6 acts as transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region (2). SCYL2 is component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles and may regulate clathrin-dependent trafficking between the TGN and/or the endosomal system (3).

Reference
1. Manning, G., Whyte, D.B., Martinez, R., Hunter, T. and Sudarsanam, S. (2002) The protein kinase complement of the human genome. Science, 298, 1912-1934. PMID: 12471243
2. UniProt Annotation:   NTKL_HUMAN;
3. UniProt Annotation:   SCYL2_HUMAN;


There are 7 genes.  Reviewed (0 or Unreviewed (7

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Pot-2426
POPTR_0001s10330
B9GKL1
POPTR_0001s10330g
2
iEKPD-Pot-2571
POPTR_0001s41030
U5GXF3
POPTR_0001s41030g
3
iEKPD-Pot-0945
POPTR_0009s15680
U5G163
POPTR_0009s15680g
4
iEKPD-Pot-2580
POPTR_0011s12020
B9HZU8
POPTR_0011s12020g
5
iEKPD-Pot-1287
POPTR_0013s09440
B9I8E8
POPTR_0013s09440g
6
iEKPD-Pot-1291
POPTR_0013s10610
B9I5H6
POPTR_0013s10610g
7
iEKPD-Pot-1700
POPTR_0019s08720
U5FI51
POPTR_0019s08720g