Solanum lycopersicum      Other/SCY


※ SCY family introduction

    SCY1 family is composed of three members in human genome (1). SCYL1 is involved in regulating COPI-mediated retrograde traffic. Isoform 6 acts as transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region (2). SCYL2 is component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles and may regulate clathrin-dependent trafficking between the TGN and/or the endosomal system (3).

Reference
1. Manning, G., Whyte, D.B., Martinez, R., Hunter, T. and Sudarsanam, S. (2002) The protein kinase complement of the human genome. Science, 298, 1912-1934. PMID: 12471243
2. UniProt Annotation:   NTKL_HUMAN;
3. UniProt Annotation:   SCYL2_HUMAN;


There are 11 genes.  Reviewed (0 or Unreviewed (11

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Sol-0204
Solyc02g080020.1
K4B9M3
2
iEKPD-Sol-1695
Solyc07g063120.2
K4CGZ5
3
iEKPD-Sol-0964
Solyc10g054310.1
K4D129
4
iEKPD-Sol-0965
Solyc10g055310.1
K4D1C3
5
iEKPD-Sol-1700
Solyc12g013840.1
K4DCR9
6
iEKPD-Sol-g027
Solyc09g074810.2
K4CV58
7
iEKPD-Sol-g004
Solyc10g055280.1
K4D1C0
8
iEKPD-Sol-0603
Solyc06g048890.2
K4C5D5
101252783
9
iEKPD-Sol-1563
Solyc08g081990.2
K4CPJ5
101263834
10
iEKPD-Sol-0561
Solyc05g052200.2
K4C1Q1
101266824
11
iEKPD-Sol-1039
Solyc11g042990.1
K4D866
101268059