Vitis vinifera      Other/SCY


※ SCY family introduction

    SCY1 family is composed of three members in human genome (1). SCYL1 is involved in regulating COPI-mediated retrograde traffic. Isoform 6 acts as transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region (2). SCYL2 is component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles and may regulate clathrin-dependent trafficking between the TGN and/or the endosomal system (3).

Reference
1. Manning, G., Whyte, D.B., Martinez, R., Hunter, T. and Sudarsanam, S. (2002) The protein kinase complement of the human genome. Science, 298, 1912-1934. PMID: 12471243
2. UniProt Annotation:   NTKL_HUMAN;
3. UniProt Annotation:   SCYL2_HUMAN;


There are 10 genes.  Reviewed (0 or Unreviewed (10

No.StatusiEKPD IDEnsemble Gene IDUniProt AccessionGene Name
1
iEKPD-Viv-0227
VIT_02s0087g01010
F6HJ10
VIT_02s0087g01010
2
iEKPD-Viv-0820
VIT_12s0055g00600
D7STA3
VIT_12s0055g00600
3
iEKPD-Viv-0835
VIT_12s0059g02560
F6HIL3
VIT_12s0059g02560
4
iEKPD-Viv-0866
VIT_13s0067g00440
F6HCE4
VIT_13s0067g00440
5
iEKPD-Viv-0880
VIT_13s0067g03110
F6HC35
VIT_13s0067g03110
6
iEKPD-Viv-1815
VIT_15s0046g01310
F6I6A3
VIT_15s0046g01310
7
iEKPD-Viv-1213
VIT_18s0001g15750
E0CQQ7
VIT_18s0001g15750
8
iEKPD-Viv-1231
VIT_18s0089g00030
D7SN24
VIT_18s0089g00030
9
iEKPD-Viv-1817
VIT_19s0014g02660
F6H242
VIT_19s0014g02660
10
iEKPD-Viv-1283
VIT_19s0014g04230
F6H2A4
VIT_19s0014g04230